* installing *source* package ‘iRafNet’ ... ** package ‘iRafNet’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/iRafNet/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c regTree.c -o regTree.o regTree.c:35:15: warning: variable 'ss' set but not used [-Wunused-but-set-variable] 35 | double d, ss, av, decsplit, ubest, sumnode; | ^ regTree.c:155:47: warning: unused variable 'mvar' [-Wunused-variable] 155 | int i, kv, j, l, *mind, *ncase, mindo, k, mvar,kk,last1,jsel; | ^~~~ regTree.c:155:55: warning: unused variable 'last1' [-Wunused-variable] 155 | int i, kv, j, l, *mind, *ncase, mindo, k, mvar,kk,last1,jsel; | ^~~~~ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c regrf.c -o regrf.o regrf.c:52:12: warning: unused variable 'errts' [-Wunused-variable] 52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^~~~~ regrf.c:52:25: warning: variable 'averrb' set but not used [-Wunused-but-set-variable] 52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^ regrf.c:52:49: warning: variable 'varY' set but not used [-Wunused-but-set-variable] 52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^ regrf.c:52:55: warning: variable 'varYts' set but not used [-Wunused-but-set-variable] 52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^ regrf.c:52:63: warning: unused variable 'r' [-Wunused-variable] 52 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^ regrf.c:53:2: warning: unused variable 'errb' [-Wunused-variable] 53 | errb = 0.0, resid=0.0, ooberr, ooberrperm, delta, *resOOB; | ^~~~ regrf.c:53:14: warning: unused variable 'resid' [-Wunused-variable] 53 | errb = 0.0, resid=0.0, ooberr, ooberrperm, delta, *resOOB; | ^~~~~ regrf.c:53:25: warning: unused variable 'ooberr' [-Wunused-variable] 53 | errb = 0.0, resid=0.0, ooberr, ooberrperm, delta, *resOOB; | ^~~~~~ regrf.c:53:33: warning: unused variable 'ooberrperm' [-Wunused-variable] 53 | errb = 0.0, resid=0.0, ooberr, ooberrperm, delta, *resOOB; | ^~~~~~~~~~ regrf.c:53:45: warning: unused variable 'delta' [-Wunused-variable] 53 | errb = 0.0, resid=0.0, ooberr, ooberrperm, delta, *resOOB; | ^~~~~ regrf.c:53:53: warning: variable 'resOOB' set but not used [-Wunused-but-set-variable] 53 | errb = 0.0, resid=0.0, ooberr, ooberrperm, delta, *resOOB; | ^ regrf.c:55:18: warning: variable 'xtmp' set but not used [-Wunused-but-set-variable] 55 | double *yb, *xtmp, *xb, *ytr, *ytree, *tgini, *sw; | ^ regrf.c:55:30: warning: variable 'ytr' set but not used [-Wunused-but-set-variable] 55 | double *yb, *xtmp, *xb, *ytr, *ytree, *tgini, *sw; | ^ regrf.c:55:36: warning: variable 'ytree' set but not used [-Wunused-but-set-variable] 55 | double *yb, *xtmp, *xb, *ytr, *ytree, *tgini, *sw; | ^ regrf.c:57:15: warning: unused variable 'mr' [-Wunused-variable] 57 | int k, m, mr, n, nOOB, j, jout, idx, ntest, last, ktmp, nPerm, | ^~ regrf.c:57:22: warning: unused variable 'nOOB' [-Wunused-variable] 57 | int k, m, mr, n, nOOB, j, jout, idx, ntest, last, ktmp, nPerm, | ^~~~ regrf.c:57:31: warning: unused variable 'jout' [-Wunused-variable] 57 | int k, m, mr, n, nOOB, j, jout, idx, ntest, last, ktmp, nPerm, | ^~~~ regrf.c:57:61: warning: variable 'nPerm' set but not used [-Wunused-but-set-variable] 57 | int k, m, mr, n, nOOB, j, jout, idx, ntest, last, ktmp, nPerm, | ^ regrf.c:58:41: warning: unused variable 'mindo' [-Wunused-variable] 58 | nsample, mdim, keepF, keepInbag,mindo; | ^~~~~ regrf.c:59:10: warning: variable 'oobpair' set but not used [-Wunused-but-set-variable] 59 | int *oobpair, varImp, localImp, *varUsed; | ^ regrf.c:61:22: warning: variable 'nodex' set but not used [-Wunused-but-set-variable] 61 | int *in, *nind, *nodex, *nodexts; | ^ regrf.c:61:30: warning: variable 'nodexts' set but not used [-Wunused-but-set-variable] 61 | int *in, *nind, *nodex, *nodexts; | ^ 22 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c rfutils.c -o rfutils.o /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o iRafNet.so regTree.o regrf.o rfutils.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/iRafNet/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/iRafNet/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/iRafNet/src' installing to /data/gannet/ripley/R/packages/tests-clang/iRafNet.Rcheck/00LOCK-iRafNet/00new/iRafNet/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iRafNet)