* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/httk.Rcheck’
* using R Under development (unstable) (2024-04-24 r86484)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 18.1.4
    flang-new version 18.1.4
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘httk/DESCRIPTION’ ... OK
* this is package ‘httk’ version ‘2.3.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘httk’ can be installed ... [51s/66s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/httk-00install.html' for details.
* used C compiler: ‘clang version 18.1.4’
* checking installed package size ... NOTE
  installed size is  6.2Mb
  sub-directories of 1Mb or more:
    data   1.8Mb
    doc    2.3Mb
    help   1.1Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [73s/96s] OK
* checking Rd files ... [12s/17s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [82s/117s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [222s/314s] OK
  Running ‘1comp_test.R’ [14s/22s]
  Comparing ‘1comp_test.Rout’ to ‘1comp_test.Rout.save’ ... OK
  Running ‘3comp_test.R’ [14s/18s]
  Comparing ‘3comp_test.Rout’ to ‘3comp_test.Rout.save’ ... OK
  Running ‘3compss_test.R’
  Comparing ‘3compss_test.Rout’ to ‘3compss_test.Rout.save’ ... OK
  Running ‘adddata_test.R’ [10s/15s]
  Comparing ‘adddata_test.Rout’ to ‘adddata_test.Rout.save’ ... OK
  Running ‘caco2_test.R’ [13s/18s]
  Comparing ‘caco2_test.Rout’ to ‘caco2_test.Rout.save’ ... OK
  Running ‘cheminfo_test.R’ [12s/18s]
  Comparing ‘cheminfo_test.Rout’ to ‘cheminfo_test.Rout.save’ ... OK
  Running ‘fetal_pbtk_testing.R’ [12s/15s]
  Comparing ‘fetal_pbtk_testing.Rout’ to ‘fetal_pbtk_testing.Rout.save’ ... OK
  Running ‘ivive_test.R’ [25s/35s]
  Comparing ‘ivive_test.Rout’ to ‘ivive_test.Rout.save’ ... OK
  Running ‘montecarlo_tests.R’ [34s/39s]
  Comparing ‘montecarlo_tests.Rout’ to ‘montecarlo_tests.Rout.save’ ... OK
  Running ‘other_tests.R’ [49s/76s]
  Comparing ‘other_tests.Rout’ to ‘other_tests.Rout.save’ ... OK
  Running ‘pbtk_test.R’ [12s/18s]
  Comparing ‘pbtk_test.Rout’ to ‘pbtk_test.Rout.save’ ... OK
  Running ‘solve_gas_test.R’ [11s/16s]
  Comparing ‘solve_gas_test.Rout’ to ‘solve_gas_test.Rout.save’ ... OK
  Running ‘unit_test.R’ [8s/11s]
  Comparing ‘unit_test.Rout’ to ‘unit_test.Rout.save’ ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [6m/10m] OK
* checking PDF version of manual ... [25s/45s] OK
* checking HTML version of manual ... [17s/26s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE