* installing *source* package ‘flare’ ... ** package ‘flare’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/flare/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c SFGen.c -o SFGen.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c euc_proj.c -o euc_proj.o euc_proj.c:20:9: warning: variable 'cnt' set but not used [-Wunused-but-set-variable] 20 | int cnt; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c mymath.c -o mymath.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c registerDynamicSymbol.c -o registerDynamicSymbol.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c slim_dantzig_ladm_scr.c -o slim_dantzig_ladm_scr.o mymath.c:141:11: warning: variable 'cnt' set but not used [-Wunused-but-set-variable] 141 | int i,cnt; | ^ slim_dantzig_ladm_scr.c:261:15: warning: variable 'ndata' set but not used [-Wunused-but-set-variable] 261 | int j,k,m,ndata,dim,nlambda,ite1,ite2,ite,max_ite0,max_ite1,max_ite2,num_scr,num_scr1,num_scr2,num_scr1_tmp,num_scr2_tmp,flag,flag1,flag2; | ^ slim_dantzig_ladm_scr.c:262:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 262 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda; | ^ slim_dantzig_ladm_scr.c:410:15: warning: variable 'ndata' set but not used [-Wunused-but-set-variable] 410 | int j,k,m,ndata,dim,nlambda,ite1,ite,max_ite0,max_ite1,num_scr,num_scr1,num_scr1_tmp,flag,flag1; | ^ slim_dantzig_ladm_scr.c:411:21: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 411 | double T,T1,rho,zero,eps,eps1,ilambda; | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c slim_lad_ladm_scr_btr.c -o slim_lad_ladm_scr_btr.o slim_lad_ladm_scr_btr.c:236:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 236 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda,nrholamb; | ^ 4 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c slim_lasso_ladm_scr.c -o slim_lasso_ladm_scr.o 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c slim_lq_ladm_scr_btr.c -o slim_lq_ladm_scr_btr.o slim_lasso_ladm_scr.c:12:52: warning: variable 'ratio' set but not used [-Wunused-but-set-variable] 12 | double gap_ext,max_dif,beta_dif,threshold,tmpd,ratio,epsT; | ^ slim_lasso_ladm_scr.c:12:58: warning: variable 'epsT' set but not used [-Wunused-but-set-variable] 12 | double gap_ext,max_dif,beta_dif,threshold,tmpd,ratio,epsT; | ^ slim_lasso_ladm_scr.c:183:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 183 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda; | ^ slim_lq_ladm_scr_btr.c:242:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 242 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda,nrholamb,qrtn; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c slim_sqrt_ladm_scr.c -o slim_sqrt_ladm_scr.o 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c slimh.c -o slimh.o slim_sqrt_ladm_scr.c:12:86: warning: variable 'ratio' set but not used [-Wunused-but-set-variable] 12 | double gap_ext,max_dif,alp_dif,beta_dif,mu_dif,threshold,tmpd,alp_tild_sq,alp_th,ratio,epsT; | ^ slim_sqrt_ladm_scr.c:12:92: warning: variable 'epsT' set but not used [-Wunused-but-set-variable] 12 | double gap_ext,max_dif,alp_dif,beta_dif,mu_dif,threshold,tmpd,alp_tild_sq,alp_th,ratio,epsT; | ^ slim_sqrt_ladm_scr.c:285:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 285 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda,sqrtn,nrholamb; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sugm_clime_ladm_scr.c -o sugm_clime_ladm_scr.o sugm_clime_ladm_scr.c:11:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 11 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sugm_tiger_ladm_scr.c -o sugm_tiger_ladm_scr.o 3 warnings generated. sugm_tiger_ladm_scr.c:12:52: warning: variable 'ratio' set but not used [-Wunused-but-set-variable] 12 | double gap_ext,max_dif,beta_dif,threshold,tmpd,ratio,epsT,tau0,tau1,tmp; | ^ sugm_tiger_ladm_scr.c:12:58: warning: variable 'epsT' set but not used [-Wunused-but-set-variable] 12 | double gap_ext,max_dif,beta_dif,threshold,tmpd,ratio,epsT,tau0,tau1,tmp; | ^ sugm_tiger_ladm_scr.c:205:24: warning: variable 'zero' set but not used [-Wunused-but-set-variable] 205 | double T,T1,T2,rho,zero,eps,eps1,eps2,ilambda,sqrtn,nrholamb,tau0; | ^ 3 warnings generated. /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o flare.so SFGen.o euc_proj.o mymath.o registerDynamicSymbol.o slim_dantzig_ladm_scr.o slim_lad_ladm_scr_btr.o slim_lasso_ladm_scr.o slim_lq_ladm_scr_btr.o slim_sqrt_ladm_scr.o slimh.o sugm_clime_ladm_scr.o sugm_tiger_ladm_scr.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/flare/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/flare/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/flare/src' installing to /data/gannet/ripley/R/packages/tests-clang/flare.Rcheck/00LOCK-flare/00new/flare/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flare)