* installing *source* package ‘ergm’ ... ** package ‘ergm’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/ergm/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c CD.c -o CD.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MCMC.c -o MCMC.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MHproposal.c -o MHproposal.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MHproposal_bd.c -o MHproposal_bd.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MHproposals.c -o MHproposals.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MHproposals_bipartite.c -o MHproposals_bipartite.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MHproposals_degree.c -o MHproposals_degree.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MHproposals_dyadnoise.c -o MHproposals_dyadnoise.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c MPLE.c -o MPLE.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c SAN.c -o SAN.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c allstatistics.c -o allstatistics.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestat.c -o changestat.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats.c -o changestats.o changestats.c:761:3: warning: variable 't210' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:9: warning: variable 't120C' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:16: warning: variable 't120U' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:23: warning: variable 't120D' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:30: warning: variable 't201' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:36: warning: variable 't030C' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:43: warning: variable 't030T' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:761:50: warning: variable 't111U' set but not used [-Wunused-but-set-variable] 761 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats.c:762:3: warning: variable 't111D' set but not used [-Wunused-but-set-variable] 762 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */ | ^ changestats.c:762:10: warning: variable 't021C' set but not used [-Wunused-but-set-variable] 762 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */ | ^ changestats.c:762:17: warning: variable 't021U' set but not used [-Wunused-but-set-variable] 762 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */ | ^ changestats.c:762:24: warning: variable 't021D' set but not used [-Wunused-but-set-variable] 762 | t111D, t021C, t021U, t021D, t102, t012; /* , t003; */ | ^ 12 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_auxnet.c -o changestats_auxnet.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_auxnetalike.c -o changestats_auxnetalike.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_coincidence.c -o changestats_coincidence.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_concurrentties.c -o changestats_concurrentties.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_dgw_sp.c -o changestats_dgw_sp.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_experimental.c -o changestats_experimental.o changestats_experimental.c:1084:16: warning: variable 't120U' set but not used [-Wunused-but-set-variable] 1084 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats_experimental.c:1084:23: warning: variable 't120D' set but not used [-Wunused-but-set-variable] 1084 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats_experimental.c:1084:43: warning: variable 't030T' set but not used [-Wunused-but-set-variable] 1084 | t210, t120C, t120U, t120D, t201, t030C, t030T, t111U, | ^ changestats_experimental.c:1085:17: warning: variable 't021U' set but not used [-Wunused-but-set-variable] 1085 | t111D, t021C, t021U, t021D, t102, t012 /*, t003 */ ; | ^ changestats_experimental.c:1085:24: warning: variable 't021D' set but not used [-Wunused-but-set-variable] 1085 | t111D, t021C, t021U, t021D, t102, t012 /*, t003 */ ; | ^ 5 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_homoproportion.c -o changestats_homoproportion.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_indices.c -o changestats_indices.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_interaction.c -o changestats_interaction.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_internal.c -o changestats_internal.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_operator.c -o changestats_operator.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_spcache.c -o changestats_spcache.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c changestats_test.c -o changestats_test.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c edgetree.c -o edgetree.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ergm_dyad_hashmap_utils.c -o ergm_dyad_hashmap_utils.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ergm_dyadgen.c -o ergm_dyadgen.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ergm_omp.c -o ergm_omp.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ergm_rlebdm.c -o ergm_rlebdm.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ergm_state.c -o ergm_state.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ergm_wtstate.c -o ergm_wtstate.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c etamap.c -o etamap.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c geodist.c -o geodist.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c godfather.c -o godfather.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c model.c -o model.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c netstats.c -o netstats.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c test_weighted_population.c -o test_weighted_population.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtCD.c -o wtCD.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtMCMC.c -o wtMCMC.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtMHproposal.c -o wtMHproposal.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtMHproposals.c -o wtMHproposals.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtSAN.c -o wtSAN.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtchangestats.c -o wtchangestats.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtchangestats_operator.c -o wtchangestats_operator.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtchangestats_test.c -o wtchangestats_test.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtedgetree.c -o wtedgetree.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtgodfather.c -o wtgodfather.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtmodel.c -o wtmodel.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I../inst/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c wtnetstats.c -o wtnetstats.o /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o ergm.so CD.o MCMC.o MHproposal.o MHproposal_bd.o MHproposals.o MHproposals_bipartite.o MHproposals_degree.o MHproposals_dyadnoise.o MPLE.o SAN.o allstatistics.o changestat.o changestats.o changestats_auxnet.o changestats_auxnetalike.o changestats_coincidence.o changestats_concurrentties.o changestats_dgw_sp.o changestats_experimental.o changestats_homoproportion.o changestats_indices.o changestats_interaction.o changestats_internal.o changestats_operator.o changestats_spcache.o changestats_test.o edgetree.o ergm_dyad_hashmap_utils.o ergm_dyadgen.o ergm_omp.o ergm_rlebdm.o ergm_state.o ergm_wtstate.o etamap.o geodist.o godfather.o init.o model.o netstats.o test_weighted_population.o wtCD.o wtMCMC.o wtMHproposal.o wtMHproposals.o wtSAN.o wtchangestats.o wtchangestats_operator.o wtchangestats_test.o wtedgetree.o wtgodfather.o wtmodel.o wtnetstats.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/ergm/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/ergm/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/ergm/src' installing to /data/gannet/ripley/R/packages/tests-clang/ergm.Rcheck/00LOCK-ergm/00new/ergm/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ergm)