* installing *source* package ‘dynaTree’ ...
** package ‘dynaTree’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/dynaTree/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG   -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c cloud.cc -o cloud.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG   -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c dynaTree.cc -o dynaTree.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c lh.c -o lh.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c linalg.c -o linalg.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c matrix.c -o matrix.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c pall.c -o pall.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG   -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c particle.cc -o particle.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rhelp.c -o rhelp.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -DRPRINT -DNDEBUG   -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c tree.cc -o tree.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o dynaTree.so cloud.o dynaTree.o init.o lh.o linalg.o matrix.o pall.o particle.o rhelp.o tree.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/dynaTree/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/dynaTree/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/dynaTree/src'
installing to /data/gannet/ripley/R/packages/tests-clang/dynaTree.Rcheck/00LOCK-dynaTree/00new/dynaTree/libs
** R
** data
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (dynaTree)