* installing *source* package ‘dglars’ ...
** package ‘dglars’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
using Fortran compiler: ‘flang-new version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/dglars/src'
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  ccd_bin_c.f90 -o ccd_bin_c.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  ccd_cvdglars.f90 -o ccd_cvdglars.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  ccd_pois_c.f90 -o ccd_pois_c.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_bin_c.f90 -o pc_bin_c.o
./pc_bin_c.f90:240:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_c.f90:37:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_c.f90:332:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_c.f90:37:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_c.f90:400:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_c.f90:37:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_bin_g.f90 -o pc_bin_g.o
./pc_bin_g.f90:265:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_g.f90:42:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_g.f90:290:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_g.f90:42:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_g.f90:396:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_bin_g.f90:42:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_cvdglars.f90 -o pc_cvdglars.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_gamma_c.f90 -o pc_gamma_c.o
./pc_gamma_c.f90:255:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_c.f90:36:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_c.f90:348:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_c.f90:36:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_c.f90:422:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_c.f90:36:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_gamma_g.f90 -o pc_gamma_g.o
./pc_gamma_g.f90:260:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_g.f90:36:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_g.f90:285:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_g.f90:36:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_g.f90:391:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gamma_g.f90:36:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_gaussian_c.f90 -o pc_gaussian_c.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_gaussian_g.f90 -o pc_gaussian_g.o
./pc_gaussian_g.f90:236:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gaussian_g.f90:33:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gaussian_g.f90:255:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n, nav, Xa, ba, eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gaussian_g.f90:33:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gaussian_g.f90:352:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_gaussian_g.f90:33:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_invgaus_c.f90 -o pc_invgaus_c.o
./pc_invgaus_c.f90:254:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_c.f90:35:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_c.f90:347:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_c.f90:35:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_c.f90:425:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_c.f90:35:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_invgaus_g.f90 -o pc_invgaus_g.o
./pc_invgaus_g.f90:261:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_g.f90:37:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_g.f90:286:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_g.f90:37:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_g.f90:393:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_invgaus_g.f90:37:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_pois_c.f90 -o pc_pois_c.o
./pc_pois_c.f90:236:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_c.f90:34:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_c.f90:328:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_c.f90:34:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_c.f90:400:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_c.f90:34:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  pc_pois_g.f90 -o pc_pois_g.o
./pc_pois_g.f90:260:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,p,X,w,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_g.f90:35:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_g.f90:285:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_g.f90:35:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_g.f90:391:5: warning: Reference to the procedure 'eta_mk' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object attributes
      call eta_mk(n,nav,Xa,ba_crct,eta)
      ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
./pc_pois_g.f90:35:9: previous reference to 'eta_mk'
          call eta_mk(n,nup,X(:,A(1:nup)),ba,eta)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  predict.f90 -o predict.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  shared.f90 -o shared.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  tools.f90 -o tools.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o dglars.so ccd_bin_c.o ccd_cvdglars.o ccd_pois_c.o init.o pc_bin_c.o pc_bin_g.o pc_cvdglars.o pc_gamma_c.o pc_gamma_g.o pc_gaussian_c.o pc_gaussian_g.o pc_invgaus_c.o pc_invgaus_g.o pc_pois_c.o pc_pois_g.o predict.o shared.o tools.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/dglars/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/dglars/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/dglars/src'
installing to /data/gannet/ripley/R/packages/tests-clang/dglars.Rcheck/00LOCK-dglars/00new/dglars/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (dglars)