* installing *source* package ‘data.table’ ...
** package ‘data.table’ successfully unpacked and MD5 sums checked
** using staged installation
zlib 1.2.11 is available ok
R CMD SHLIB supports OpenMP without any extra hint
** libs
using C compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/data.table/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c assign.c -o assign.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c between.c -o between.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c bmerge.c -o bmerge.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c chmatch.c -o chmatch.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c cj.c -o cj.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c coalesce.c -o coalesce.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c dogroups.c -o dogroups.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fastmean.c -o fastmean.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fcast.c -o fcast.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fifelse.c -o fifelse.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fmelt.c -o fmelt.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c forder.c -o forder.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c frank.c -o frank.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fread.c -o fread.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c freadR.c -o freadR.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c froll.c -o froll.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c frollR.c -o frollR.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c frolladaptive.c -o frolladaptive.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fsort.c -o fsort.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fwrite.c -o fwrite.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c fwriteR.c -o fwriteR.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c gsumm.c -o gsumm.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c idatetime.c -o idatetime.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c ijoin.c -o ijoin.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c init.c -o init.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c inrange.c -o inrange.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c nafill.c -o nafill.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c negate.c -o negate.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c nqrecreateindices.c -o nqrecreateindices.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c openmp-utils.c -o openmp-utils.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c programming.c -o programming.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c quickselect.c -o quickselect.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c rbindlist.c -o rbindlist.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c reorder.c -o reorder.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c shift.c -o shift.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c snprintf.c -o snprintf.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c subset.c -o subset.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c transpose.c -o transpose.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c types.c -o types.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c uniqlist.c -o uniqlist.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c utils.c -o utils.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c vecseq.c -o vecseq.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c wrappers.c -o wrappers.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o fsort.o fwrite.o fwriteR.o gsumm.o idatetime.o ijoin.o init.o inrange.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -lz
PKG_CFLAGS = -fopenmp
PKG_LIBS = -fopenmp -lz
if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi
if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/data.table/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/data.table/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/data.table/src'
installing to /data/gannet/ripley/R/packages/tests-clang/data.table.Rcheck/00LOCK-data.table/00new/data.table/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (data.table)