* installing *source* package ‘cxhull’ ... ** package ‘cxhull’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cxhull/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c convexhull.c -o convexhull.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cxhull_edges.c -o cxhull_edges.o cxhull_edges.c:368:16: warning: variable 'i_facet' set but not used [-Wunused-but-set-variable] 368 | unsigned i_facet = 0; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c geom2_r.c -o geom2_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c geom_r.c -o geom_r.o geom_r.c:656:24: warning: variable 'flip' set but not used [-Wunused-but-set-variable] 656 | int i, j, k, pivoti, flip = 0; | ^ geom_r.c:974:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 974 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */ | ^ geom_r.c:1011:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 1011 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */ | ^ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c global_r.c -o global_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c io_r.c -o io_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c libqhull_r.c -o libqhull_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c mem_r.c -o mem_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c merge_r.c -o merge_r.o merge_r.c:222:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 222 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */ | ^ merge_r.c:330:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 330 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */ | ^ merge_r.c:1938:19: warning: variable 'total' set but not used [-Wunused-but-set-variable] 1938 | int cycles = 0, total = 0, facets, nummerge; | ^ merge_r.c:2198:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 2198 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */ | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c poly2_r.c -o poly2_r.o poly2_r.c:72:38: warning: variable 'notgood' set but not used [-Wunused-but-set-variable] 72 | int numpart = 0, facet_i, facet_n, notgood = 0, notverified = 0; | ^ poly2_r.c:1291:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 1291 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */ | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c poly_r.c -o poly_r.o 4 warnings generated. poly_r.c:253:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 253 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */ | ^ poly_r.c:591:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 591 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */ | ^ poly_r.c:1061:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 1061 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */ | ^ poly_r.c:1093:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 1093 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */ | ^ 4 warnings generated. 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c qset_r.c -o qset_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c random_r.c -o random_r.o random_r.c:86:7: warning: misleading indentation; statement is not part of the previous 'else' [-Wmisleading-indentation] 86 | strcat(command, s); | ^ random_r.c:84:6: note: previous statement is here 84 | }else | ^ qset_r.c:723:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 723 | void** freelistp; /* used if !qh_NOmem by qh_memfree_() */ | ^ qset_r.c:924:10: warning: variable 'freelistp' set but not used [-Wunused-but-set-variable] 924 | void** freelistp; /* used if !qh_NOmem by qh_memalloc_() */ | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c stat_r.c -o stat_r.o 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c user_r.c -o user_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c usermem_r.c -o usermem_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c userprintf_r.c -o userprintf_r.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c utils.c -o utils.o /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o cxhull.so convexhull.o cxhull_edges.o geom2_r.o geom_r.o global_r.o init.o io_r.o libqhull_r.o mem_r.o merge_r.o poly2_r.o poly_r.o qset_r.o random_r.o stat_r.o user_r.o usermem_r.o userprintf_r.o utils.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cxhull/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cxhull/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cxhull/src' installing to /data/gannet/ripley/R/packages/tests-clang/cxhull.Rcheck/00LOCK-cxhull/00new/cxhull/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cxhull)