* installing *source* package ‘cubature’ ...
** package ‘cubature’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src'
((cd Cuba && \
./configure && \
make libcuba.a AR="ar" ARFLAGS="-rv" RANLIB="ranlib" CC="/usr/local/clang18/bin/clang -std=gnu17" CFLAGS="-O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common") && \
touch cuba.ts)
checking for gcc... /usr/local/clang18/bin/clang -std=gnu17
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether /usr/local/clang18/bin/clang -std=gnu17 accepts -g... yes
checking for /usr/local/clang18/bin/clang -std=gnu17 option to accept ISO C89... none needed
checking for gfortran... gfortran
checking whether we are using the GNU Fortran compiler... yes
checking whether gfortran accepts -g... yes
checking for ranlib... ranlib
checking for a BSD-compatible install... /usr/bin/install -c
checking for an ANSI C-conforming const... ((cd cubature-1.0.4 && \
(make libcubature.a CC="/usr/local/clang18/bin/clang -std=gnu17" CFLAGS="-O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common" AR="ar" RANLIB="ranlib")) && \
touch cubature.ts)
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src/cubature-1.0.4'
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common   -c -o hcubature.o hcubature.c
yes
checking for inline... inline
checking for long double with more range or precision than double... yes
checking how to run the C preprocessor... /usr/local/clang18/bin/clang -std=gnu17 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... /usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common   -c -o pcubature.o pcubature.c
yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for size_t... ar cr libcubature.a  hcubature.o pcubature.o
ranlib libcubature.a
yes
checking for ssize_t... make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src/cubature-1.0.4'
yes
checking for pid_t... yes
checking for powl... yes
checking for erf... yes
checking vfork.h usability... no
checking vfork.h presence... no
checking for vfork.h... no
checking for fork... yes
checking for vfork... yes
checking for working fork... yes
checking for working vfork... (cached) yes
checking for working alloca.h... yes
checking for alloca... yes
checking build system type... x86_64-unknown-linux-gnu
checking host system type... x86_64-unknown-linux-gnu
checking for shmget... yes
checking for getloadavg... yes
checking for variable-size arrays... yes
checking for MathLink... no
checking for qmake... qmake
Qmake version: 1.07a (Qt 3.3.8b)
Qmake is free software from Trolltech ASA.
configure: creating ./config.status
config.status: creating makefile
config.status: creating config.h
make[2]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src/Cuba'
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -I./src/vegas -DNOUNDERSCORE -c -o Vegas.o ./src/vegas/Vegas.c
ar -rv libcuba.a Vegas.o
ar: creating libcuba.a
a - Vegas.o
rm -f Vegas.o
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -I./src/suave -DNOUNDERSCORE -c -o Suave.o ./src/suave/Suave.c
ar -rv libcuba.a Suave.o
a - Suave.o
rm -f Suave.o
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -I./src/divonne -DNOUNDERSCORE -c -o Divonne.o ./src/divonne/Divonne.c
ar -rv libcuba.a Divonne.o
a - Divonne.o
rm -f Divonne.o
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -I./src/cuhre -DNOUNDERSCORE -c -o Cuhre.o ./src/cuhre/Cuhre.c
ar -rv libcuba.a Cuhre.o
a - Cuhre.o
rm -f Cuhre.o
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -DNOUNDERSCORE -c -o Fork.o ./src/common/Fork.c
ar -rv libcuba.a Fork.o
a - Fork.o
rm -f Fork.o
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -DNOUNDERSCORE -c -o Global.o ./src/common/Global.c
ar -rv libcuba.a Global.o
a - Global.o
rm -f Global.o
/usr/local/clang18/bin/clang -std=gnu17 -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -fpic -I. -I../inst/include -I./src/common -c -o Data.o ./src/common/Data.c
ar -rv libcuba.a Data.o
a - Data.o
rm -f Data.o
make[2]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src/Cuba'
/usr/local/clang18/bin/clang -std=gnu17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./src/common -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I. -I../inst/include -I./src/common -fpic  -O3 -Wall -pedantic -Wno-strict-prototypes -Wp,-D_FORTIFY_SOURCE=3  -c cubature_init.c -o cubature_init.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./src/common -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c Rcpp-Cuba.cpp -o Rcpp-Cuba.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./src/common -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c Rcpp-cubature.cpp -o Rcpp-cubature.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./src/common -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o cubature.so Rcpp-Cuba.o Rcpp-cubature.o RcppExports.o cubature_init.o -L./cubature-1.0.4 -L./Cuba -lcubature -lcuba
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cubature/src'
installing to /data/gannet/ripley/R/packages/tests-clang/cubature.Rcheck/00LOCK-cubature/00new/cubature/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cubature)