* installing *source* package ‘cmbClust’ ...
** package ‘cmbClust’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cmbClust/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c AllPerms.c -o AllPerms.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c EM.c -o EM.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c EM_Estep.c -o EM_Estep.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c EM_Mstep.c -o EM_Mstep.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c EM_llk.c -o EM_llk.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order.c -o Order.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order_EM.c -o Order_EM.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order_EMEM.c -o Order_EMEM.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order_EM_Estep.c -o Order_EM_Estep.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order_EM_Mstep1.c -o Order_EM_Mstep1.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order_EM_Mstep2.c -o Order_EM_Mstep2.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c Order_EM_llk.c -o Order_EM_llk.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libArray.c -o libArray.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libCEigen.c -o libCEigen.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libEVD.c -o libEVD.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c libMatrix.c -o libMatrix.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c mbc.c -o mbc.o
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -D__HAVE_R_ -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o cmbClust.so AllPerms.o EM.o EM_Estep.o EM_Mstep.o EM_llk.o Order.o Order_EM.o Order_EMEM.o Order_EM_Estep.o Order_EM_Mstep1.o Order_EM_Mstep2.o Order_EM_llk.o libArray.o libCEigen.o libEVD.o libMatrix.o mbc.o registerDynamicSymbol.o -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cmbClust/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/cmbClust/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/cmbClust/src'
installing to /data/gannet/ripley/R/packages/tests-clang/cmbClust.Rcheck/00LOCK-cmbClust/00new/cmbClust/libs
** R
** data
** demo
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (cmbClust)