* installing *source* package ‘arcpbf’ ... ** package ‘arcpbf’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/arcpbf/src' rm -Rf arcpbf.so ./rust/target/release/libarcpbf.a entrypoint.o /data/gannet/ripley/R/packages/tests-clang/arcpbf/src/.cargo /data/gannet/ripley/R/packages/tests-clang/arcpbf/src/vendor /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c entrypoint.c -o entrypoint.o if [ -f ./rust/vendor.tar.xz ]; then \ tar xf rust/vendor.tar.xz && \ mkdir -p /data/gannet/ripley/R/packages/tests-clang/arcpbf/src/.cargo && \ cp rust/vendor-config.toml /data/gannet/ripley/R/packages/tests-clang/arcpbf/src/.cargo/config.toml; \ fi # In some environments, ~/.cargo/bin might not be included in PATH, so we need # to set it here to ensure cargo can be invoked. It is appended to PATH and # therefore is only used if cargo is absent from the user's PATH. if [ "" != "true" ]; then \ export CARGO_HOME=/data/gannet/ripley/R/packages/tests-clang/arcpbf/src/.cargo; \ fi && \ export PATH="/usr/local/clang/bin:.:/data/gannet/ripley/bin:/usr/local/texbin:/usr/local/bin:/usr/sbin:/usr/lib64/qt-3.3/bin:/usr/share/Modules/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/usr/lib64/openmpi/bin:/data/gannet/ripley/.cargo/bin" && \ cargo build -j 2 --offline --lib --release --manifest-path=./rust/Cargo.toml --target-dir ./rust/target && \ echo `cargo --version` && echo `rustc --version`; Compiling proc-macro2 v1.0.69 Compiling unicode-ident v1.0.12 Compiling anyhow v1.0.75 Compiling libR-sys v0.6.0 Compiling quote v1.0.33 Compiling syn v2.0.38 Compiling either v1.9.0 Compiling itertools v0.11.0 Compiling paste v1.0.14 Compiling extendr-api v0.6.0 Compiling bytes v1.5.0 Compiling once_cell v1.18.0 Compiling prost-derive v0.12.1 Compiling extendr-macros v0.6.0 Compiling prost v0.12.1 Compiling esripbf v0.1.0 (/data/gannet/ripley/R/packages/tests-clang/arcpbf/src/rust/esripbf) Compiling arcpbf v0.1.0 (/data/gannet/ripley/R/packages/tests-clang/arcpbf/src/rust/arcpbf) Finished release [optimized] target(s) in 1m 17s cargo 1.69.0 rustc 1.69.0 (84c898d65 2023-04-16) (Fedora 1.69.0-1.fc36) rm -Rf /data/gannet/ripley/R/packages/tests-clang/arcpbf/src/.cargo /data/gannet/ripley/R/packages/tests-clang/arcpbf/src/vendor ./rust/target/release/build; \ /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o arcpbf.so entrypoint.o -L./rust/target/release -larcpbf make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/arcpbf/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/arcpbf/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/arcpbf/src' installing to /data/gannet/ripley/R/packages/tests-clang/arcpbf.Rcheck/00LOCK-arcpbf/00new/arcpbf/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (arcpbf)