* installing *source* package ‘UtilityFrailtyPH12’ ...
** package ‘UtilityFrailtyPH12’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/UtilityFrailtyPH12/src'
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c PH12UT1.cpp -o PH12UT1.o
In file included from PH12UT1.cpp:5:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo.h:29:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57:
In file included from /data/gannet/ripley/R/test-clang/RcppArmadillo/include/armadillo:26:
/data/gannet/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/config.hpp:321:11: warning: INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed [-W#pragma-messages]
  321 |   #pragma message ("INFO: support for ARMA_DONT_PRINT_ERRORS option has been removed")
      |           ^
/data/gannet/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/config.hpp:326:13: warning: INFO: suggest to use ARMA_WARN_LEVEL option instead [-W#pragma-messages]
  326 |     #pragma message ("INFO: suggest to use ARMA_WARN_LEVEL option instead")
      |             ^
/data/gannet/ripley/R/test-clang/RcppArmadillo/include/armadillo_bits/config.hpp:329:11: warning: INFO: see the documentation for details [-W#pragma-messages]
  329 |   #pragma message ("INFO: see the documentation for details")
      |           ^
PH12UT1.cpp:448:9: warning: unused variable 'epprop' [-Wunused-variable]
  448 |  double epprop = 0; //proposal values for epsilon 
      |         ^~~~~~
PH12UT1.cpp:449:9: warning: unused variable 'muprop' [-Wunused-variable]
  449 | double  muprop = 0; //proposal for mu_epsilon
      |         ^~~~~~
PH12UT1.cpp:489:10: warning: unused variable 'epEC' [-Wunused-variable]
  489 |   double epEC = 1;
      |          ^~~~
PH12UT1.cpp:490:10: warning: unused variable 'epTC' [-Wunused-variable]
  490 |   double epTC = 1;
      |          ^~~~
7 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o UtilityFrailtyPH12.so PH12UT1.o RcppExports.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/UtilityFrailtyPH12/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/UtilityFrailtyPH12/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/UtilityFrailtyPH12/src'
installing to /data/gannet/ripley/R/packages/tests-clang/UtilityFrailtyPH12.Rcheck/00LOCK-UtilityFrailtyPH12/00new/UtilityFrailtyPH12/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (UtilityFrailtyPH12)