* installing *source* package ‘TDAstats’ ...
** package ‘TDAstats’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/TDAstats/src'
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c ripser_short.cpp -o ripser_short.o
ripser_short.cpp:52:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
   52 |     return true;
      |     ^
ripser_short.cpp:50:3: note: previous statement is here
   50 |   for (coefficient_t_ripser p = 3, q = n / p, r = n % p; p <= q; p += 2, q = n / p, r = n % p)
      |   ^
ripser_short.cpp:167:7: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  167 |       return diam;
      |       ^
ripser_short.cpp:165:5: note: previous statement is here
  165 |     for (index_t_ripser i = 0; i <= dim; ++i)
      |     ^
ripser_short.cpp:557:3: warning: unused variable 'numCols' [-Wunused-variable]
  557 |                 numCols = inputMat.ncol();
      |                 ^~~~~~~
ripser_short.cpp:677:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation]
  677 |     return ans;
      |     ^
ripser_short.cpp:671:3: note: previous statement is here
  671 |   for (int i = 0; i < pers_hom.size(); i++)
      |   ^
4 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o TDAstats.so RcppExports.o ripser_short.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/TDAstats/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/TDAstats/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/TDAstats/src'
installing to /data/gannet/ripley/R/packages/tests-clang/TDAstats.Rcheck/00LOCK-TDAstats/00new/TDAstats/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TDAstats)