* installing *source* package ‘StanHeaders’ ... ** package ‘StanHeaders’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ using C++ compiler: ‘clang version 18.1.4’ using C++17 make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/StanHeaders/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodea.c -o cvodes/cvodea.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodea_io.c -o cvodes/cvodea_io.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes.c -o cvodes/cvodes.o cvodes/cvodes.c:9137:12: warning: variable 'cv_mem' set but not used [-Wunused-but-set-variable] 9137 | CVodeMem cv_mem; | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_bandpre.c -o cvodes/cvodes_bandpre.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_bbdpre.c -o cvodes/cvodes_bbdpre.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_diag.c -o cvodes/cvodes_diag.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_direct.c -o cvodes/cvodes_direct.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_io.c -o cvodes/cvodes_io.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_ls.c -o cvodes/cvodes_ls.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_nls.c -o cvodes/cvodes_nls.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_nls_sim.c -o cvodes/cvodes_nls_sim.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_nls_stg.c -o cvodes/cvodes_nls_stg.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_nls_stg1.c -o cvodes/cvodes_nls_stg1.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c cvodes/cvodes_spils.c -o cvodes/cvodes_spils.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_band.c -o sundials/sundials_band.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_context.c -o sundials/sundials_context.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_dense.c -o sundials/sundials_dense.o 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_direct.c -o sundials/sundials_direct.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_futils.c -o sundials/sundials_futils.o sundials/sundials_direct.c:387:14: warning: variable 'a' set but not used [-Wunused-but-set-variable] 387 | realtype **a; | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_iterative.c -o sundials/sundials_iterative.o 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_linearsolver.c -o sundials/sundials_linearsolver.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_math.c -o sundials/sundials_math.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_matrix.c -o sundials/sundials_matrix.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_memory.c -o sundials/sundials_memory.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_nonlinearsolver.c -o sundials/sundials_nonlinearsolver.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_nvector.c -o sundials/sundials_nvector.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_nvector_senswrapper.c -o sundials/sundials_nvector_senswrapper.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_profiler.c -o sundials/sundials_profiler.o sundials/sundials_profiler.c:437:10: warning: unused variable 'average' [-Wunused-variable] 437 | double average = ts->average; | ^~~~~~~ sundials/sundials_profiler.c:438:10: warning: unused variable 'percent' [-Wunused-variable] 438 | double percent = strcmp((const char*) kv->key, (const char*) SUNDIALS_ROOT_TIMER) ? maximum / p->sundials_time * 100 : 100; | ^~~~~~~ 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sundials/sundials_version.c -o sundials/sundials_version.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sunmatrix/band/sunmatrix_band.c -o sunmatrix/band/sunmatrix_band.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sunmatrix/dense/sunmatrix_dense.c -o sunmatrix/dense/sunmatrix_dense.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sunlinsol/band/sunlinsol_band.c -o sunlinsol/band/sunlinsol_band.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sunlinsol/dense/sunlinsol_dense.c -o sunlinsol/dense/sunlinsol_dense.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sunnonlinsol/newton/sunnonlinsol_newton.c -o sunnonlinsol/newton/sunnonlinsol_newton.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.c -o sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idaa.c -o idas/idaa.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idaa_io.c -o idas/idaa_io.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas.c -o idas/idas.o idas/idas.c:7918:10: warning: variable 'IDA_mem' set but not used [-Wunused-but-set-variable] 7918 | IDAMem IDA_mem; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_bbdpre.c -o idas/idas_bbdpre.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_direct.c -o idas/idas_direct.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_ic.c -o idas/idas_ic.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_io.c -o idas/idas_io.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_ls.c -o idas/idas_ls.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_nls.c -o idas/idas_nls.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_nls_sim.c -o idas/idas_nls_sim.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_nls_stg.c -o idas/idas_nls_stg.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c idas/idas_spils.c -o idas/idas_spils.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c kinsol/kinsol.c -o kinsol/kinsol.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c kinsol/kinsol_bbdpre.c -o kinsol/kinsol_bbdpre.o kinsol/kinsol.c:2373:10: warning: variable 'kin_mem' set but not used [-Wunused-but-set-variable] 2373 | KINMem kin_mem; | ^ kinsol/kinsol.c:2445:10: warning: variable 'kin_mem' set but not used [-Wunused-but-set-variable] 2445 | KINMem kin_mem; | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c kinsol/kinsol_direct.c -o kinsol/kinsol_direct.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c kinsol/kinsol_io.c -o kinsol/kinsol_io.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c kinsol/kinsol_ls.c -o kinsol/kinsol_ls.o 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c kinsol/kinsol_spils.c -o kinsol/kinsol_spils.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -DNO_FPRINTF_OUTPUT -I"../inst/include" -I"sundials" -include stan_sundials_printf_override.hpp -DBOOST_DISABLE_ASSERTS -DBOOST_PHOENIX_NO_VARIADIC_EXPRESSION -DBOOST_NO_AUTO_PTR -D_REENTRANT -DSTAN_THREADS -DSTRICT_R_HEADERS -DUSE_PTHREAD -I'/data/gannet/ripley/R/test-clang/RcppEigen/include' -I'/data/gannet/ripley/R/test-clang/RcppParallel/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c nvector/serial/nvector_serial.c -o nvector/serial/nvector_serial.o nvector/serial/nvector_serial.c:257:13: warning: variable 'xd' set but not used [-Wunused-but-set-variable] 257 | realtype *xd; | ^ 1 warning generated. ar -rs ../lib/libStanHeaders.a cvodes/cvodea.o cvodes/cvodea_io.o cvodes/cvodes.o cvodes/cvodes_bandpre.o cvodes/cvodes_bbdpre.o cvodes/cvodes_diag.o cvodes/cvodes_direct.o cvodes/cvodes_io.o cvodes/cvodes_ls.o cvodes/cvodes_nls.o cvodes/cvodes_nls_sim.o cvodes/cvodes_nls_stg.o cvodes/cvodes_nls_stg1.o cvodes/cvodes_spils.o sundials/sundials_band.o sundials/sundials_context.o sundials/sundials_dense.o sundials/sundials_direct.o sundials/sundials_futils.o sundials/sundials_iterative.o sundials/sundials_linearsolver.o sundials/sundials_math.o sundials/sundials_matrix.o sundials/sundials_memory.o sundials/sundials_nonlinearsolver.o sundials/sundials_nvector.o sundials/sundials_nvector_senswrapper.o sundials/sundials_profiler.o sundials/sundials_version.o sunmatrix/band/sunmatrix_band.o sunmatrix/dense/sunmatrix_dense.o sunlinsol/band/sunlinsol_band.o sunlinsol/dense/sunlinsol_dense.o sunnonlinsol/newton/sunnonlinsol_newton.o sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o idas/idaa.o idas/idaa_io.o idas/idas.o idas/idas_bbdpre.o idas/idas_direct.o idas/idas_ic.o idas/idas_io.o idas/idas_ls.o idas/idas_nls.o idas/idas_nls_sim.o idas/idas_nls_stg.o idas/idas_spils.o sundials/sundials_band.o sundials/sundials_context.o sundials/sundials_dense.o sundials/sundials_direct.o sundials/sundials_futils.o sundials/sundials_iterative.o sundials/sundials_linearsolver.o sundials/sundials_math.o sundials/sundials_matrix.o sundials/sundials_memory.o sundials/sundials_nonlinearsolver.o sundials/sundials_nvector.o sundials/sundials_nvector_senswrapper.o sundials/sundials_profiler.o sundials/sundials_version.o sunmatrix/band/sunmatrix_band.o sunmatrix/dense/sunmatrix_dense.o sunlinsol/band/sunlinsol_band.o sunlinsol/dense/sunlinsol_dense.o sunnonlinsol/newton/sunnonlinsol_newton.o sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o kinsol/kinsol.o kinsol/kinsol_bbdpre.o kinsol/kinsol_direct.o kinsol/kinsol_io.o kinsol/kinsol_ls.o kinsol/kinsol_spils.o sundials/sundials_band.o sundials/sundials_context.o sundials/sundials_dense.o sundials/sundials_direct.o sundials/sundials_futils.o sundials/sundials_iterative.o sundials/sundials_linearsolver.o sundials/sundials_math.o sundials/sundials_matrix.o sundials/sundials_memory.o sundials/sundials_nonlinearsolver.o sundials/sundials_nvector.o sundials/sundials_nvector_senswrapper.o sundials/sundials_profiler.o sundials/sundials_version.o sunmatrix/band/sunmatrix_band.o sunmatrix/dense/sunmatrix_dense.o sunlinsol/band/sunlinsol_band.o sunlinsol/dense/sunlinsol_dense.o sunnonlinsol/newton/sunnonlinsol_newton.o sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o nvector/serial/nvector_serial.o sundials/sundials_math.o ar: creating ../lib/libStanHeaders.a make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/StanHeaders/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/StanHeaders/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/StanHeaders/src' installing via 'install.libs.R' to /data/gannet/ripley/R/packages/tests-clang/StanHeaders.Rcheck/00LOCK-StanHeaders/00new/StanHeaders ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (StanHeaders)