* installing *source* package ‘SemiCompRisks’ ... ** package ‘SemiCompRisks’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPscr.c -o BAFT_DPscr.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPscr_Updates.c -o BAFT_DPscr_Updates.o BAFT_DPscr_Updates.c:1574:42: warning: variable 'LL_negInf' set but not used [-Wunused-but-set-variable] 1574 | int i, j, k, n_ir, r_ind, wh_ri, u_, LL_negInf; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPsurv.c -o BAFT_DPsurv.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_DPsurv_Updates.c -o BAFT_DPsurv_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNscr.c -o BAFT_LNscr.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNscr_Updates.c -o BAFT_LNscr_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNsurv.c -o BAFT_LNsurv.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BAFT_LNsurv_Updates.c -o BAFT_LNsurv_Updates.o BAFT_LNsurv_Updates.c:140:64: warning: variable 'logprior' set but not used [-Wunused-but-set-variable] 140 | double eta, eta_prop, loglh, loglh_prop, logR, beta0_prop, logprior, logprior_prop; | ^ BAFT_LNsurv_Updates.c:140:74: warning: variable 'logprior_prop' set but not used [-Wunused-but-set-variable] 140 | double eta, eta_prop, loglh, loglh_prop, logR, beta0_prop, logprior, logprior_prop; | ^ 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScr.c -o BpeDpCorScr.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScrSM.c -o BpeDpCorScrSM.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScrSM_Updates.c -o BpeDpCorScrSM_Updates.o BpeDpCorScrSM_Updates.c:507:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 507 | double nu_lam, nu_lam_prop; | ^ BpeDpCorScrSM_Updates.c:734:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 734 | double nu_lam, nu_lam_prop; | ^ BpeDpCorScrSM_Updates.c:948:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 948 | double nu_lam, nu_lam_prop; | ^ /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorScr_Updates.c -o BpeDpCorScr_Updates.o BpeDpCorScr_Updates.c:514:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 514 | double nu_lam, nu_lam_prop; | ^ BpeDpCorScr_Updates.c:746:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 746 | double nu_lam, nu_lam_prop; | ^ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorSurv.c -o BpeDpCorSurv.o BpeDpCorScr_Updates.c:965:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 965 | double nu_lam, nu_lam_prop; | ^ BpeDpCorSurv.c:233:37: warning: variable 'pCP' set but not used [-Wunused-but-set-variable] 233 | double pRP, pBH, pSP, pBI, pDI, pCP, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeDpCorSurv_Updates.c -o BpeDpCorSurv_Updates.o BpeDpCorSurv_Updates.c:186:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 186 | double nu_lam, nu_lam_prop; | ^ BpeDpCorSurv_Updates.c:1261:18: warning: variable 'mu_temp' set but not used [-Wunused-but-set-variable] 1261 | double logR, mu_temp, zeta_temp; | ^ 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScr.c -o BpeMvnCorScr.o 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScrSM.c -o BpeMvnCorScrSM.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScrSM_Updates.c -o BpeMvnCorScrSM_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorScr_Updates.c -o BpeMvnCorScr_Updates.o BpeMvnCorScrSM_Updates.c:503:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 503 | double nu_lam, nu_lam_prop; | ^ BpeMvnCorScrSM_Updates.c:731:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 731 | double nu_lam, nu_lam_prop; | ^ BpeMvnCorScrSM_Updates.c:954:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 954 | double nu_lam, nu_lam_prop; | ^ BpeMvnCorScr_Updates.c:503:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 503 | double nu_lam, nu_lam_prop; | ^ BpeMvnCorScr_Updates.c:732:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 732 | double nu_lam, nu_lam_prop; | ^ BpeMvnCorScr_Updates.c:955:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 955 | double nu_lam, nu_lam_prop; | ^ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorSurv.c -o BpeMvnCorSurv.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeMvnCorSurv_Updates.c -o BpeMvnCorSurv_Updates.o BpeMvnCorSurv.c:201:42: warning: variable 'pVP' set but not used [-Wunused-but-set-variable] 201 | double pRP, pBH, pSP, pBI, pDI, pCP, pVP, choice; | ^ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScr.c -o BpeScr.o 1 warning generated. BpeMvnCorSurv_Updates.c:181:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 181 | double nu_lam, nu_lam_prop; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScrSM.c -o BpeScrSM.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScrSM_Updates.c -o BpeScrSM_Updates.o BpeScrSM_Updates.c:519:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 519 | double nu_lam, nu_lam_prop; | ^ BpeScrSM_Updates.c:728:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 728 | double nu_lam, nu_lam_prop; | ^ BpeScrSM_Updates.c:949:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 949 | double nu_lam, nu_lam_prop; | ^ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeScr_Updates.c -o BpeScr_Updates.o BpeScr_Updates.c:520:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 520 | double nu_lam, nu_lam_prop; | ^ BpeScr_Updates.c:736:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 736 | double nu_lam, nu_lam_prop; | ^ BpeScr_Updates.c:958:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 958 | double nu_lam, nu_lam_prop; | ^ 3 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeSurv.c -o BpeSurv.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BpeSurv_Updates.c -o BpeSurv_Updates.o BpeSurv_Updates.c:313:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 313 | double nu_lam, nu_lam_prop; | ^ BpeSurv_Updates.c:518:20: warning: variable 'nu_lam_prop' set but not used [-Wunused-but-set-variable] 518 | double nu_lam, nu_lam_prop; | ^ 2 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibCorSurv.c -o BweibCorSurv.o BweibCorSurv.c:144:32: warning: variable 'pVP' set but not used [-Wunused-but-set-variable] 144 | double pRP, pSH, pSC, pCP, pVP, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibCorSurv_Updates.c -o BweibCorSurv_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScr.c -o BweibDpCorScr.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScrSM.c -o BweibDpCorScrSM.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScrSM_Updates.c -o BweibDpCorScrSM_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorScr_Updates.c -o BweibDpCorScr_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorSurv.c -o BweibDpCorSurv.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibDpCorSurv_Updates.c -o BweibDpCorSurv_Updates.o BweibDpCorSurv_Updates.c:553:18: warning: variable 'mu_temp' set but not used [-Wunused-but-set-variable] 553 | double logR, mu_temp, zeta_temp; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScr.c -o BweibMvnCorScr.o BweibMvnCorScr.c:320:99: warning: variable 'pVP' set but not used [-Wunused-but-set-variable] 320 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, pMP, pCP1, pCP2, pCP3, pVP, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScrSM.c -o BweibMvnCorScrSM.o BweibMvnCorScrSM.c:335:99: warning: variable 'pVP' set but not used [-Wunused-but-set-variable] 335 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, pMP, pCP1, pCP2, pCP3, pVP, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScrSM_Updates.c -o BweibMvnCorScrSM_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibMvnCorScr_Updates.c -o BweibMvnCorScr_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScr.c -o BweibScr.o BweibScr.c:231:71: warning: variable 'pFP' set but not used [-Wunused-but-set-variable] 231 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScrSM.c -o BweibScrSM.o BweibScrSM.c:237:71: warning: variable 'pFP' set but not used [-Wunused-but-set-variable] 237 | double pRP1, pRP2, pRP3, pSH1, pSH2, pSH3, pSC1, pSC2, pSC3, pDP, pFP, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScrSM_Updates.c -o BweibScrSM_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibScr_Updates.c -o BweibScr_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibSurv.c -o BweibSurv.o BweibSurv.c:109:22: warning: variable 'pSC' set but not used [-Wunused-but-set-variable] 109 | double pRP, pSH, pSC, choice; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c BweibSurv_Updates.c -o BweibSurv_Updates.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c Utilities.c -o Utilities.o Utilities.c:6029:52: warning: variable 'log1' set but not used [-Wunused-but-set-variable] 6029 | double mu_k, sigSq_k, mixProb_den, val1, val2, log1, logk, temp; | ^ Utilities.c:6029:58: warning: variable 'logk' set but not used [-Wunused-but-set-variable] 6029 | double mu_k, sigSq_k, mixProb_den, val1, val2, log1, logk, temp; | ^ Utilities.c:6029:64: warning: variable 'temp' set but not used [-Wunused-but-set-variable] 6029 | double mu_k, sigSq_k, mixProb_den, val1, val2, log1, logk, temp; | ^ Utilities.c:6382:35: warning: variable 'y2_temp' set but not used [-Wunused-but-set-variable] 6382 | double eta1, eta2, eta3, gam, y2_temp; | ^ 4 warnings generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c registerDynamicSymbol.c -o registerDynamicSymbol.o /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o SemiCompRisks.so BAFT_DPscr.o BAFT_DPscr_Updates.o BAFT_DPsurv.o BAFT_DPsurv_Updates.o BAFT_LNscr.o BAFT_LNscr_Updates.o BAFT_LNsurv.o BAFT_LNsurv_Updates.o BpeDpCorScr.o BpeDpCorScrSM.o BpeDpCorScrSM_Updates.o BpeDpCorScr_Updates.o BpeDpCorSurv.o BpeDpCorSurv_Updates.o BpeMvnCorScr.o BpeMvnCorScrSM.o BpeMvnCorScrSM_Updates.o BpeMvnCorScr_Updates.o BpeMvnCorSurv.o BpeMvnCorSurv_Updates.o BpeScr.o BpeScrSM.o BpeScrSM_Updates.o BpeScr_Updates.o BpeSurv.o BpeSurv_Updates.o BweibCorSurv.o BweibCorSurv_Updates.o BweibDpCorScr.o BweibDpCorScrSM.o BweibDpCorScrSM_Updates.o BweibDpCorScr_Updates.o BweibDpCorSurv.o BweibDpCorSurv_Updates.o BweibMvnCorScr.o BweibMvnCorScrSM.o BweibMvnCorScrSM_Updates.o BweibMvnCorScr_Updates.o BweibScr.o BweibScrSM.o BweibScrSM_Updates.o BweibScr_Updates.o BweibSurv.o BweibSurv_Updates.o Utilities.o registerDynamicSymbol.o -L/usr/local/lib -lgsl -lgslcblas -lm make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/SemiCompRisks/src' installing to /data/gannet/ripley/R/packages/tests-clang/SemiCompRisks.Rcheck/00LOCK-SemiCompRisks/00new/SemiCompRisks/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SemiCompRisks)