* installing *source* package ‘RPostgreSQL’ ... ** package ‘RPostgreSQL’ successfully unpacked and MD5 sums checked ** using staged installation checking build system type... x86_64-pc-linux-gnu checking host system type... x86_64-pc-linux-gnu checking target system type... x86_64-pc-linux-gnu checking for pg_config... /usr/bin/pg_config PG_CONFIG_BINDIR = /usr/bin PG_CONFIG_DOCDIR = /usr/share/doc/pgsql PG_CONFIG_HTMLDIR = /usr/share/doc/pgsql PG_CONFIG_INCLUDEDIR = /usr/include PG_CONFIG_PKGINCLUDEDIR = /usr/include/pgsql PG_CONFIG_INCLUDEDIR-SERVER = /usr/include/pgsql/server PG_CONFIG_LIBDIR = /usr/lib64 PG_CONFIG_PKGLIBDIR = /usr/lib64/pgsql PG_CONFIG_LOCALEDIR = /usr/share/locale PG_CONFIG_MANDIR = /usr/share/man PG_CONFIG_SHAREDIR = /usr/share/pgsql PG_CONFIG_SYSCONFDIR = /etc PG_CONFIG_PGXS = /usr/lib64/pgsql/pgxs/src/makefiles/pgxs.mk PG_CONFIG_CONFIGURE = '--build=x86_64-redhat-linux-gnu' '--host=x86_64-redhat-linux-gnu' '--program-prefix=' '--disable-dependency-tracking' '--prefix=/usr' '--exec-prefix=/usr' '--bindir=/usr/bin' '--sbindir=/usr/sbin' '--sysconfdir=/etc' '--datadir=/usr/share' '--includedir=/usr/include' '--libdir=/usr/lib64' '--libexecdir=/usr/libexec' '--localstatedir=/var' '--sharedstatedir=/var/lib' '--mandir=/usr/share/man' '--infodir=/usr/share/info' '--disable-rpath' '--with-ldap' '--with-openssl' '--with-gssapi' '--enable-nls' '--without-readline' '--datadir=/usr/share/pgsql' 'build_alias=x86_64-redhat-linux-gnu' 'host_alias=x86_64-redhat-linux-gnu' 'CC=gcc' 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe cflwarnall cflwarnerror=format-security cflwarnp,-D_FORTIFY_SOURCE=2 cflwarnp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'LDFLAGS=cflwarnl,-z,relro cflwarnl,--as-needed cflwarnl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 cflwarnl,--build-id=sha1 cflwarnl,-dT,/builddir/build/BUILD/.package_note-libpq-14.1-2.fc36.x86_64.ld' 'CXX=g++' 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe cflwarnall cflwarnerror=format-security cflwarnp,-D_FORTIFY_SOURCE=2 cflwarnp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' 'PKG_CONFIG_PATH=:/usr/lib64/pkgconfig:/usr/share/pkgconfig' PG_CONFIG_CC = gcc PG_CONFIG_CPPFLAGS = -D_GNU_SOURCE PG_CONFIG_CFLAGS = cflwarnall cflwarnmissing-prototypes cflwarnpointer-arith cflwarndeclaration-after-statement cflwarnerror=vla cflwarnendif-labels cflwarnmissing-format-attribute cflwarnimplicit-fallthrough=3 cflwarncast-function-type cflwarnformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard cflwarnno-format-truncation cflwarnno-stringop-truncation -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe cflwarnall cflwarnerror=format-security cflwarnp,-D_FORTIFY_SOURCE=2 cflwarnp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection PG_CONFIG_CFLAGS_SL = -fPIC PG_CONFIG_LDFLAGS = cflwarnl,-z,relro cflwarnl,--as-needed cflwarnl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 cflwarnl,--build-id=sha1 cflwarnl,-dT,/builddir/build/BUILD/.package_note-libpq-14.1-2.fc36.x86_64.ld cflwarnl,--as-needed PG_CONFIG_LDFLAGS_EX = PG_CONFIG_LDFLAGS_SL = PG_CONFIG_LIBS = -lpgcommon -lpgport -lssl -lcrypto -lgssapi_krb5 -lz -lm PG_CONFIG_VERSION = PostgreSQL 14.1 configure: checking for PostgreSQL header files /usr/lib64 /usr/include /usr/local/clang18/bin/clang -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -I/usr/include -L/usr/lib64 conftest.c -lpq -o pqconftest ./pqconftest 140001...runs fine checking for "/usr/include/libpq-fe.h"... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RPostgreSQL/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-DBI.c -o RS-DBI.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-PQescape.c -o RS-PQescape.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-PostgreSQL.c -o RS-PostgreSQL.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-pgsql-copy.c -o RS-pgsql-copy.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-pgsql-getResult.c -o RS-pgsql-getResult.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-pgsql-pqexec.c -o RS-pgsql-pqexec.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I/usr/include -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RS-pgsql-pqexecparams.c -o RS-pgsql-pqexecparams.o /usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RPostgreSQL.so RS-DBI.o RS-PQescape.o RS-PostgreSQL.o RS-pgsql-copy.o RS-pgsql-getResult.o RS-pgsql-pqexec.o RS-pgsql-pqexecparams.o -L/usr/lib64 -lpq make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RPostgreSQL/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RPostgreSQL/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RPostgreSQL/src' installing to /data/gannet/ripley/R/packages/tests-clang/RPostgreSQL.Rcheck/00LOCK-RPostgreSQL/00new/RPostgreSQL/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RPostgreSQL)