* installing *source* package ‘RJSONIO’ ... ** package ‘RJSONIO’ successfully unpacked and MD5 sums checked ** using staged installation Trying to find libjson.h header file checking for gcc... /usr/local/clang18/bin/clang checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether /usr/local/clang18/bin/clang accepts -g... yes checking for /usr/local/clang18/bin/clang option to enable C11 features... none needed USE_LOCAL = "" Minor Version: 6 Using local libjson code. Copying files from src/libjson/Source /data/gannet/ripley/R/packages/tests-clang/RJSONIO JSONAllocator.cpp JSONChildren.cpp JSONDebug.cpp JSONIterators.cpp JSONMemory.cpp JSONNode.cpp JSONNode_Mutex.cpp JSONPreparse.cpp JSONStream.cpp JSONValidator.cpp JSONWorker.cpp JSONWriter.cpp internalJSONNode.cpp libjson.cpp configure: creating ./config.status config.status: creating src/Makevars config.status: creating tools/cleanup ** libs using C compiler: ‘clang version 18.1.4’ using C++ compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RJSONIO/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c ConvertUTF.c -o ConvertUTF.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONAllocator.cpp -o JSONAllocator.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONChildren.cpp -o JSONChildren.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONDebug.cpp -o JSONDebug.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONIterators.cpp -o JSONIterators.o In file included from JSONChildren.cpp:2: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. In file included from JSONIterators.cpp:1: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONMemory.cpp -o JSONMemory.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONNode.cpp -o JSONNode.o In file included from JSONNode.cpp:1: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONNode_Mutex.cpp -o JSONNode_Mutex.o In file included from JSONNode_Mutex.cpp:1: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONPreparse.cpp -o JSONPreparse.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONStream.cpp -o JSONStream.o In file included from JSONPreparse.cpp:10: In file included from libjson/Source/JSONPreparse.h:5: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. In file included from JSONStream.cpp:4: In file included from libjson/Source/JSONWorker.h:4: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONValidator.cpp -o JSONValidator.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONWorker.cpp -o JSONWorker.o In file included from JSONWorker.cpp:1: In file included from libjson/Source/JSONWorker.h:4: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c JSONWriter.cpp -o JSONWriter.o In file included from JSONWriter.cpp:1: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c JSON_parser.c -o JSON_parser.o JSON_parser.c:485:25: warning: unused variable 'ok' [-Wunused-variable] 485 | int ok = sscanf(jc->parse_buffer, "%lf", &tmp); | ^~ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RJSON.c -o RJSON.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c init.c -o init.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c internalJSONNode.cpp -o internalJSONNode.o In file included from internalJSONNode.cpp:1: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c libjson.cpp -o libjson.o In file included from libjson.cpp:11: In file included from libjson/Source/JSONNode.h:5: In file included from libjson/Source/internalJSONNode.h:11: libjson/Source/JSONSharedString.h:87:31: warning: private field 'parent' is not used [-Wunused-private-field] 87 | const json_shared_string * parent; | ^ 1 warning generated. /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c rlibjson.c -o rlibjson.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -Ilibjson -Ilibjson/Source -DNEW_JSON_NEW_STREAM -DNDEBUG=1 -DJSON_VALIDATE -DJSON_STREAM=1 -DJSON_READ_PRIORITY=1 -DJSON_LIBRARY=1 -DJSON_ISO_STRICT -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c rparser.c -o rparser.o rparser.c:152:18: warning: assigning to 'ParserCallback' (aka 'void (*)(void *, void *)') from 'void *' converts between void pointer and function pointer [-Wpedantic] 152 | callback = R_ExternalPtrAddr(cbCall); | ^ ~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RJSONIO.so ConvertUTF.o JSONAllocator.o JSONChildren.o JSONDebug.o JSONIterators.o JSONMemory.o JSONNode.o JSONNode_Mutex.o JSONPreparse.o JSONStream.o JSONValidator.o JSONWorker.o JSONWriter.o JSON_parser.o RJSON.o init.o internalJSONNode.o libjson.o rlibjson.o rparser.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RJSONIO/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RJSONIO/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RJSONIO/src' installing to /data/gannet/ripley/R/packages/tests-clang/RJSONIO.Rcheck/00LOCK-RJSONIO/00new/RJSONIO/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RJSONIO)