* installing *source* package ‘RClickhouse’ ... ** package ‘RClickhouse’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘clang version 18.1.4’ using C++ compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RClickhouse/src' /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c RClickhouse_init.c -o RClickhouse_init.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c connection.cpp -o connection.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c result.cpp -o result.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/string.cpp -o vendor/clickhouse-cpp/clickhouse/columns/string.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/date.cpp -o vendor/clickhouse-cpp/clickhouse/columns/date.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/numeric.cpp -o vendor/clickhouse-cpp/clickhouse/columns/numeric.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/decimal.cpp -o vendor/clickhouse-cpp/clickhouse/columns/decimal.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/tuple.cpp -o vendor/clickhouse-cpp/clickhouse/columns/tuple.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/array.cpp -o vendor/clickhouse-cpp/clickhouse/columns/array.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/factory.cpp -o vendor/clickhouse-cpp/clickhouse/columns/factory.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/nullable.cpp -o vendor/clickhouse-cpp/clickhouse/columns/nullable.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/enum.cpp -o vendor/clickhouse-cpp/clickhouse/columns/enum.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/uuid.cpp -o vendor/clickhouse-cpp/clickhouse/columns/uuid.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/ip4.cpp -o vendor/clickhouse-cpp/clickhouse/columns/ip4.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/columns/ip6.cpp -o vendor/clickhouse-cpp/clickhouse/columns/ip6.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/query.cpp -o vendor/clickhouse-cpp/clickhouse/query.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/base/platform.cpp -o vendor/clickhouse-cpp/clickhouse/base/platform.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/base/socket.cpp -o vendor/clickhouse-cpp/clickhouse/base/socket.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/base/input.cpp -o vendor/clickhouse-cpp/clickhouse/base/input.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/base/output.cpp -o vendor/clickhouse-cpp/clickhouse/base/output.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/base/coded.cpp -o vendor/clickhouse-cpp/clickhouse/base/coded.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/base/compressed.cpp -o vendor/clickhouse-cpp/clickhouse/base/compressed.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/client.cpp -o vendor/clickhouse-cpp/clickhouse/client.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/types/types.cpp -o vendor/clickhouse-cpp/clickhouse/types/types.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/types/type_parser.cpp -o vendor/clickhouse-cpp/clickhouse/types/type_parser.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/clickhouse/block.cpp -o vendor/clickhouse-cpp/clickhouse/block.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/contrib/cityhash/city.cc -o vendor/clickhouse-cpp/contrib/cityhash/city.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/contrib/lz4/lz4.c -o vendor/clickhouse-cpp/contrib/lz4/lz4.o /usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I. -I../inst/include -I./vendor/clickhouse-cpp -I./vendor/clickhouse-cpp/contrib -I./vendor/clickhouse-cpp/contrib/bigerint -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3 -c vendor/clickhouse-cpp/contrib/lz4/lz4hc.c -o vendor/clickhouse-cpp/contrib/lz4/lz4hc.o /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RClickhouse.so RClickhouse_init.o RcppExports.o connection.o result.o vendor/clickhouse-cpp/clickhouse/columns/string.o vendor/clickhouse-cpp/clickhouse/columns/date.o vendor/clickhouse-cpp/clickhouse/columns/numeric.o vendor/clickhouse-cpp/clickhouse/columns/decimal.o vendor/clickhouse-cpp/clickhouse/columns/tuple.o vendor/clickhouse-cpp/clickhouse/columns/array.o vendor/clickhouse-cpp/clickhouse/columns/factory.o vendor/clickhouse-cpp/clickhouse/columns/nullable.o vendor/clickhouse-cpp/clickhouse/columns/enum.o vendor/clickhouse-cpp/clickhouse/columns/uuid.o vendor/clickhouse-cpp/clickhouse/columns/ip4.o vendor/clickhouse-cpp/clickhouse/columns/ip6.o vendor/clickhouse-cpp/clickhouse/query.o vendor/clickhouse-cpp/clickhouse/base/platform.o vendor/clickhouse-cpp/clickhouse/base/socket.o vendor/clickhouse-cpp/clickhouse/base/input.o vendor/clickhouse-cpp/clickhouse/base/output.o vendor/clickhouse-cpp/clickhouse/base/coded.o vendor/clickhouse-cpp/clickhouse/base/compressed.o vendor/clickhouse-cpp/clickhouse/client.o vendor/clickhouse-cpp/clickhouse/types/types.o vendor/clickhouse-cpp/clickhouse/types/type_parser.o vendor/clickhouse-cpp/clickhouse/block.o vendor/clickhouse-cpp/contrib/cityhash/city.o vendor/clickhouse-cpp/contrib/lz4/lz4.o vendor/clickhouse-cpp/contrib/lz4/lz4hc.o -lpthread make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RClickhouse/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RClickhouse/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RClickhouse/src' installing to /data/gannet/ripley/R/packages/tests-clang/RClickhouse.Rcheck/00LOCK-RClickhouse/00new/RClickhouse/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RClickhouse)