* installing *source* package ‘RCSF’ ... ** package ‘RCSF’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src' /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c CSF.cpp -o CSF.o In file included from CSF.cpp:23: In file included from ./Cloth.h:59: ./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 83 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 99 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Cloth.cpp -o Cloth.o 2 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Constraint.cpp -o Constraint.o In file included from Cloth.cpp:18: In file included from ./Cloth.h:59: ./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 83 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 99 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Cloth.cpp:18: ./Cloth.h:79:9: warning: private field 'rigidness' is not used [-Wunused-private-field] 79 | int rigidness; | ^ ./Cloth.h:80:12: warning: private field 'time_step' is not used [-Wunused-private-field] 80 | double time_step; | ^ In file included from Constraint.cpp:18: In file included from ./Constraint.h:23: ./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 83 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 99 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from Constraint.cpp:18: ./Constraint.h:32:12: warning: private field 'rest_distance' is not used [-Wunused-private-field] 32 | double rest_distance; // the length between particle p1 and p2 in rest configuration | ^ 3 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Particle.cpp -o Particle.o 4 warnings generated. In file included from Particle.cpp:18: ./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 83 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 99 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Progress.cpp -o Progress.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c R_CSF.cpp -o R_CSF.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Rasterization.cpp -o Rasterization.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o In file included from Rasterization.cpp:18: In file included from ./Rasterization.h:22: In file included from ./Cloth.h:59: ./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 83 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 99 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c XYZReader.cpp -o XYZReader.o /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c c2cdist.cpp -o c2cdist.o In file included from c2cdist.cpp:18: In file included from ./c2cdist.h:22: In file included from ./Cloth.h:59: ./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 83 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion] 99 | tmpDist = MAX_INF; | ~ ^~~~~~~ ./Particle.h:27:20: note: expanded from macro 'MAX_INF' 27 | #define MAX_INF std::numeric_limits::max() | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c point_cloud.cpp -o point_cloud.o /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RCSF.so CSF.o Cloth.o Constraint.o Particle.o Progress.o R_CSF.o Rasterization.o RcppExports.o XYZReader.o c2cdist.o point_cloud.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src' installing to /data/gannet/ripley/R/packages/tests-clang/RCSF.Rcheck/00LOCK-RCSF/00new/RCSF/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RCSF)