* installing *source* package ‘RCSF’ ...
** package ‘RCSF’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c CSF.cpp -o CSF.o
In file included from CSF.cpp:23:
In file included from ./Cloth.h:59:
./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
83 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
99 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Cloth.cpp -o Cloth.o
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Constraint.cpp -o Constraint.o
In file included from Cloth.cpp:18:
In file included from ./Cloth.h:59:
./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
83 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
99 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from Cloth.cpp:18:
./Cloth.h:79:9: warning: private field 'rigidness' is not used [-Wunused-private-field]
79 | int rigidness;
| ^
./Cloth.h:80:12: warning: private field 'time_step' is not used [-Wunused-private-field]
80 | double time_step;
| ^
In file included from Constraint.cpp:18:
In file included from ./Constraint.h:23:
./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
83 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
99 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from Constraint.cpp:18:
./Constraint.h:32:12: warning: private field 'rest_distance' is not used [-Wunused-private-field]
32 | double rest_distance; // the length between particle p1 and p2 in rest configuration
| ^
3 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Particle.cpp -o Particle.o
4 warnings generated.
In file included from Particle.cpp:18:
./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
83 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
99 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Progress.cpp -o Progress.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c R_CSF.cpp -o R_CSF.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Rasterization.cpp -o Rasterization.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c RcppExports.cpp -o RcppExports.o
In file included from Rasterization.cpp:18:
In file included from ./Rasterization.h:22:
In file included from ./Cloth.h:59:
./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
83 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
99 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c XYZReader.cpp -o XYZReader.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c c2cdist.cpp -o c2cdist.o
In file included from c2cdist.cpp:18:
In file included from ./c2cdist.h:22:
In file included from ./Cloth.h:59:
./Particle.h:83:30: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
83 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
./Particle.h:99:28: warning: implicit conversion from 'type' (aka 'long') to 'double' changes value from 9223372036854775807 to 9223372036854775808 [-Wimplicit-const-int-float-conversion]
99 | tmpDist = MAX_INF;
| ~ ^~~~~~~
./Particle.h:27:20: note: expanded from macro 'MAX_INF'
27 | #define MAX_INF std::numeric_limits<long>::max()
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c point_cloud.cpp -o point_cloud.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o RCSF.so CSF.o Cloth.o Constraint.o Particle.o Progress.o R_CSF.o Rasterization.o RcppExports.o XYZReader.o c2cdist.o point_cloud.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/RCSF/src'
installing to /data/gannet/ripley/R/packages/tests-clang/RCSF.Rcheck/00LOCK-RCSF/00new/RCSF/libs
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RCSF)