* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/MPTmultiverse.Rcheck’ * using R Under development (unstable) (2024-04-24 r86484) * using platform: x86_64-pc-linux-gnu * R was compiled by clang version 18.1.4 flang-new version 18.1.4 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘MPTmultiverse/DESCRIPTION’ ... OK * this is package ‘MPTmultiverse’ version ‘0.4-2’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘MPTmultiverse’ can be installed ... [11s/15s] OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/MPTmultiverse-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking whether startup messages can be suppressed ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [19s/24s] OK * checking Rd files ... NOTE checkRd: (-1) fit_mpt.Rd:139-142: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:143-148: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:149-159: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:167-168: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:169: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:170: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:171: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:176-177: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:178-179: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:180-181: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:182-184: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:185-186: Lost braces in \itemize; meant \describe ? checkRd: (-1) fit_mpt.Rd:187-188: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:12: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:13: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:14: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:18: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:19: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:20: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:21: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:24: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) mpt_options.Rd:27: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking LazyData ... NOTE 'LazyData' is specified without a 'data' directory * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [25s/79s] OK Running ‘testthat.R’ [24s/79s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [25s/33s] OK * checking PDF version of manual ... [8s/13s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs