* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/LongCART.Rcheck’
* using R Under development (unstable) (2024-04-24 r86484)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 18.1.4
    flang-new version 18.1.4
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘LongCART/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘LongCART’ version ‘3.2’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘LongCART’ can be installed ... [24s/31s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/LongCART-00install.html' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [37s/47s] OK
* checking Rd files ... NOTE
checkRd: (-1) ProfilePlot.Rd:16: Lost braces
    16 |   \item{timevar.power}{Mandatory when the fixed part of the fitted model contains term as time with power not equal to  1. For example, if fixed part of the model is t + sqrt{t} + cov1, then specify \code{c(1, 0.5, NA}. If fixed part of the model is t + t^2 + cov1, then specify \code{c(1, 2, NA)}.}
       |                                                                                                                                                                               ^
checkRd: (-1) StabCat.surv.Rd:34: Lost braces; missing escapes or markup?
    34 | Lognormal distribution: f(t)=(1/t)*(1/sqrt(2*pi*sigma^2))*exp[-(1/2)*{(log(t)-mu)/sigma}^2]
       |                                                                      ^
checkRd: (-1) StabCat.surv.Rd:36: Lost braces; missing escapes or markup?
    36 | Normal distribution: f(t)=(1/sqrt(2*pi*sigma^2))*exp[-(1/2)*{(t-mu)/sigma}^2]
       |                                                             ^
checkRd: (-1) StabCont.surv.Rd:34: Lost braces; missing escapes or markup?
    34 | Lognormal distribution: f(t)=(1/t)*(1/sqrt(2*pi*sigma^2))*exp[-(1/2)*{(log(t)-mu)/sigma}^2]
       |                                                                      ^
checkRd: (-1) StabCont.surv.Rd:36: Lost braces; missing escapes or markup?
    36 | Normal distribution: f(t)=(1/sqrt(2*pi*sigma^2))*exp[-(1/2)*{(t-mu)/sigma}^2]
       |                                                             ^
checkRd: (-1) SurvCART.Rd:36: Lost braces; missing escapes or markup?
    36 | Lognormal distribution: f(t)=(1/t)*(1/sqrt(2*pi*sigma^2))*exp[-(1/2)*{(log(t)-mu)/sigma}^2]
       |                                                                      ^
checkRd: (-1) SurvCART.Rd:38: Lost braces; missing escapes or markup?
    38 | Normal distribution: f(t)=(1/sqrt(2*pi*sigma^2))*exp[-(1/2)*{(t-mu)/sigma}^2]
       |                                                             ^
checkRd: (-1) succ_ia.Rd:39: Lost braces
    39 |   \item{sd.ia}{Standard deviation of estimated mean difference (in one-sample continuous  case) or estimated mean (in two-sample continuous case) at interim analysis. If \code{stderr.ia} is specified, then the value of \code{sd.ia} is ignored. If code{stderr.ia} is not specified, then mandatory for continuous case.}
       |                                                                                                                                                                                                                                                            ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [12s/14s] OK
* checking PDF version of manual ... [9s/14s] OK
* checking HTML version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 NOTE