* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/LocalControl.Rcheck’
* using R Under development (unstable) (2024-04-24 r86484)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    clang version 18.1.4
    flang-new version 18.1.4
* running under: Fedora Linux 36 (Workstation Edition)
* using session charset: UTF-8
* using option ‘--no-stop-on-test-error’
* checking for file ‘LocalControl/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘LocalControl’ version ‘1.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘LocalControl’ can be installed ... [61s/50s] OK
See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/LocalControl-00install.html' for details.
* used C compiler: ‘clang version 18.1.4’
* used C++ compiler: ‘clang version 18.1.4’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [20s/24s] OK
* checking Rd files ... NOTE
checkRd: (-1) LocalControl.Rd:84: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LocalControl.Rd:85: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LocalControl.Rd:86: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LocalControl.Rd:87: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) LocalControl.Rd:88: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSbalan.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSloess.Rd:47-65: Lost braces
    47 | {Once one has fitted a somewhat smooth curve through scatters of observed outcomes, Y,
       | ^
checkRd: (-1) SPSloess.Rd:67-74: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SPSloess.Rd:71: Escaped LaTeX specials: \^ \^
checkRd: (-1) SPSloess.Rd:75-77: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SPSloess.Rd:78: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SPSloess.Rd:79: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SPSloess.Rd:80: Lost braces in \itemize; meant \describe ?
checkRd: (-1) SPSlogit.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSlogit.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSnbins.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:45-47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) SPSoutco.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:30-32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:34-35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:36-37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaccum.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:48-50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:54: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:56: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:60: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:61: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:62: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:63: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:64: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:65: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:66: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:67: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSaltdd.Rd:68: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPShclus.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPShclus.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPShclus.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPShclus.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:33-35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:38: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:39: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSivadj.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:17: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:18: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:19: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:20: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:21: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:26: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:27: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:28: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:30: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:31: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:32: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:34: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:35: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:36: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:38-40: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:41: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:42: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:43: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:44: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:45: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:46: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:47: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:48: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:49: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:50: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly
checkRd: (-1) UPSnnltd.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking sizes of PDF files under ‘inst/doc’ ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... [6s/11s] OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [30s/38s] OK
* checking PDF version of manual ... [9s/14s] OK
* checking HTML version of manual ... NOTE
Found the following HTML validation problems:
UPSLTDdist.html:54:1 (UPSLTDdist.Rd:17): Warning: trimming empty <dt>
plot.LocalControlCR.html:63:1 (plot.LocalControlCR.Rd:29): Warning: trimming empty <dt>
plot.LocalControlCS.html:59:1 (plot.LocalControlCS.Rd:24): Warning: trimming empty <dt>
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 3 NOTEs