* installing *source* package ‘LCMCR’ ...
** package ‘LCMCR’ successfully unpacked and MD5 sums checked
** using staged installation
checking for gcc... /usr/local/clang18/bin/clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether /usr/local/clang18/bin/clang accepts -g... yes
checking for /usr/local/clang18/bin/clang option to enable C11 features... none needed
checking for gsl-config... /usr/bin/gsl-config
checking for GSL - version >= 2.5... yes
checking for inline... inline
configure: creating ./config.status
config.status: creating src/Makevars
** libs
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/LCMCR/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c R_Interface/registration.cpp -o R_Interface/registration.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c R_Interface/R_Lcm_CR.cpp -o R_Interface/R_Lcm_CR.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c NPLCM_CR_Basic_Freq.cpp -o NPLCM_CR_Basic_Freq.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/R_Environ_Simple.cpp -o daniel2/R_Environ_Simple.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/CChain.cpp -o daniel2/CChain.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/CParam.cpp -o daniel2/CParam.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/CData.cpp -o daniel2/CData.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/CParam_generic.cpp -o daniel2/CParam_generic.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/CVariable_Container.cpp -o daniel2/CVariable_Container.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include   -I/usr/include -I./ -I../ -DUSING_R -I -DHAVE_INLINE -DNDEBUG -DR_NO_REMAP  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c daniel2/dan_array_utils.cpp -o daniel2/dan_array_utils.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o LCMCR.so R_Interface/registration.o R_Interface/R_Lcm_CR.o ./NPLCM_CR_Basic_Freq.o daniel2/R_Environ_Simple.o daniel2/CChain.o daniel2/CParam.o daniel2/CData.o daniel2/CParam_generic.o daniel2/CVariable_Container.o daniel2/dan_array_utils.o -lgsl -lgslcblas -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/LCMCR/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/LCMCR/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/LCMCR/src'
installing to /data/gannet/ripley/R/packages/tests-clang/LCMCR.Rcheck/00LOCK-LCMCR/00new/LCMCR/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (LCMCR)