* installing *source* package ‘HMMextra0s’ ...
** package ‘HMMextra0s’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘clang version 18.1.4’
using Fortran compiler: ‘flang-new version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/HMMextra0s/src'
/usr/local/clang18/bin/clang -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG   -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -Wp,-D_FORTIFY_SOURCE=3  -c HMMextra0s_init.c -o HMMextra0s_init.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  estep.f90 -o estep.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  loop1.f90 -o loop1.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  loop2.f90 -o loop2.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  mstep.f90 -o mstep.o
/usr/local/clang18/bin/flang-new  -fpic  -O2 -pedantic  -c  prsloop.f90 -o prsloop.o
/usr/local/clang18/bin/clang -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o HMMextra0s.so HMMextra0s_init.o estep.o loop1.o loop2.o mstep.o prsloop.o -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/HMMextra0s/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/HMMextra0s/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/HMMextra0s/src'
installing to /data/gannet/ripley/R/packages/tests-clang/HMMextra0s.Rcheck/00LOCK-HMMextra0s/00new/HMMextra0s/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (HMMextra0s)