* installing *source* package ‘Corbi’ ... ** package ‘Corbi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘clang version 18.1.4’ make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Corbi/src' /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Corbi.cpp -o Corbi.o In file included from Corbi.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c NetDEG.cpp -o NetDEG.o In file included from NetDEG.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c NetQuery.cpp -o NetQuery.o In file included from NetQuery.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c ProAlign.cpp -o ProAlign.o In file included from ProAlign.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c Subnets.cpp -o Subnets.o In file included from Subnets.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c multihyper.cpp -o multihyper.o In file included from multihyper.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c quantile.cpp -o quantile.o In file included from quantile.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG -isystem /usr/local/clang18/include -I/usr/local/clang/include -fpic -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3 -c utils.cpp -o utils.o In file included from utils.cpp:1: In file included from ./Corbi.h:5: ./misc.h:88:5: warning: misleading indentation; statement is not part of the previous 'for' [-Wmisleading-indentation] 88 | return value; | ^ ./misc.h:82:3: note: previous statement is here 82 | for (int i = 0; i < length(list); i++) | ^ 1 warning generated. /usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o Corbi.so Corbi.o NetDEG.o NetQuery.o ProAlign.o Subnets.o multihyper.o quantile.o utils.o make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Corbi/src' make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/Corbi/src' make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/Corbi/src' installing to /data/gannet/ripley/R/packages/tests-clang/Corbi.Rcheck/00LOCK-Corbi/00new/Corbi/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Corbi)