Install log for 'BayesRGMM'

* installing *source* package ‘BayesRGMM’ ...
** package ‘BayesRGMM’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
using C++11
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/BayesRGMM/src'
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppDist/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c CPREMs.cpp -o CPREMs.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppDist/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c ProbitML.cpp -o ProbitML.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppDist/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c ProbitML_ARMA_KB.cpp -o ProbitML_ARMA_KB.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppDist/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppDist/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c Utility.cpp -o Utility.o
CPREMs.cpp:538:43: warning: variable 'ESS' set but not used [-Wunused-but-set-variable]
  538 |     double CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.;
      |                                           ^
CPREMs.cpp:538:51: warning: variable 'GP' set but not used [-Wunused-but-set-variable]
  538 |     double CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.;
      |                                                   ^
ProbitML.cpp:377:48: warning: variable 'ESS' set but not used [-Wunused-but-set-variable]
  377 |     double pit, CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.;
      |                                                ^
ProbitML.cpp:377:56: warning: variable 'GP' set but not used [-Wunused-but-set-variable]
  377 |     double pit, CPO_tmp, ESS_GP_tmp, RJ1, RJ2, ESS=0., GP=0.;
      |                                                        ^
ProbitML_ARMA_KB.cpp:626:26: warning: variable 'ESS' set but not used [-Wunused-but-set-variable]
  626 |     double pit, CPO_tmp, ESS=0, GP=0, ESS_GP_tmp, RJ1, RJ2;
      |                          ^
ProbitML_ARMA_KB.cpp:626:33: warning: variable 'GP' set but not used [-Wunused-but-set-variable]
  626 |     double pit, CPO_tmp, ESS=0, GP=0, ESS_GP_tmp, RJ1, RJ2;
      |                                 ^
/usr/local/clang18/bin/clang++ -std=gnu++11 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/RcppDist/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include   -fopenmp  -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c tmvrnormGibbs_KJLEE.cpp -o tmvrnormGibbs_KJLEE.o
2 warnings generated.
2 warnings generated.
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++11 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o BayesRGMM.so CPREMs.o ProbitML.o ProbitML_ARMA_KB.o RcppExports.o Utility.o tmvrnormGibbs_KJLEE.o -fopenmp -L/data/gannet/ripley/R/R-clang/lib -lRlapack -L/data/gannet/ripley/R/R-clang/lib -lRblas -lFortran_main -lFortranRuntime -lFortranDecimal -lm
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/BayesRGMM/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/BayesRGMM/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/BayesRGMM/src'
installing to /data/gannet/ripley/R/packages/tests-clang/BayesRGMM.Rcheck/00LOCK-BayesRGMM/00new/BayesRGMM/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BayesRGMM)