* installing *source* package ‘BSL’ ...
** package ‘BSL’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘clang version 18.1.4’
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/BSL/src'
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c RcppExports.cpp -o RcppExports.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c simulate_cell.cpp -o simulate_cell.o
simulate_cell.cpp:35:9: warning: variable 'num_motility_prop' set but not used [-Wunused-but-set-variable]
   35 |     int num_motility_prop = 0, num_prolif_prop = 0;
      |         ^
simulate_cell.cpp:35:32: warning: variable 'num_prolif_prop' set but not used [-Wunused-but-set-variable]
   35 |     int num_motility_prop = 0, num_prolif_prop = 0;
      |                                ^
2 warnings generated.
/usr/local/clang18/bin/clang++ -std=gnu++17 -I"/data/gannet/ripley/R/R-clang/include" -DNDEBUG  -I'/data/gannet/ripley/R/test-clang/RcppArmadillo/include' -I'/data/gannet/ripley/R/test-clang/Rcpp/include' -isystem /usr/local/clang18/include -I/usr/local/clang/include    -fpic  -O3 -Wall -pedantic -frtti -Wp,-D_FORTIFY_SOURCE=3   -c simulate_toad.cpp -o simulate_toad.o
/usr/local/clang18/bin/clang++ -std=gnu++17 -shared -L/usr/local/clang/lib64 -L/usr/local/clang18/lib -L/usr/local/clang18/lib/x86_64-unknown-linux-gnu -L/usr/local/gcc13/lib64 -L/usr/local/lib64 -o BSL.so RcppExports.o simulate_cell.o simulate_toad.o
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/BSL/src'
make[1]: Entering directory '/data/gannet/ripley/R/packages/tests-clang/BSL/src'
make[1]: Leaving directory '/data/gannet/ripley/R/packages/tests-clang/BSL/src'
installing to /data/gannet/ripley/R/packages/tests-clang/BSL.Rcheck/00LOCK-BSL/00new/BSL/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
*** initialize "MODEL" ***
has simulation function: FALSE 
has summary statistics function: FALSE 
has initial guess / point estimate of the parameter: FALSE 
an empty (invalid) MODEL object has been created due to one or more missing slots
*** end initialize ***
*** initialize "MODEL" ***
has simulation function: FALSE 
has summary statistics function: FALSE 
has initial guess / point estimate of the parameter: FALSE 
an empty (invalid) MODEL object has been created due to one or more missing slots
*** end initialize ***
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BSL)