* using log directory ‘/data/gannet/ripley/R/packages/tests-clang/AvInertia.Rcheck’ * using R Under development (unstable) (2024-04-24 r86484) * using platform: x86_64-pc-linux-gnu * R was compiled by clang version 18.1.4 flang-new version 18.1.4 * running under: Fedora Linux 36 (Workstation Edition) * using session charset: UTF-8 * using option ‘--no-stop-on-test-error’ * checking for file ‘AvInertia/DESCRIPTION’ ... OK * this is package ‘AvInertia’ version ‘0.0.2’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘AvInertia’ can be installed ... OK See 'https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-fedora-clang/AvInertia-00install.html' for details. * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... NOTE Namespaces in Imports field not imported from: ‘readxl’ ‘reshape2’ ‘stringr’ ‘tidyr’ All declared Imports should be used. * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [14s/19s] OK * checking Rd files ... NOTE checkRd: (-1) combine_inertialprop.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) combine_inertialprop.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) combine_inertialprop.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) combine_inertialprop.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) combine_inertialprop.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:13-14: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:21-23: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:24-25: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:26-27: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:28-29: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:30-31: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:32-33: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:34-35: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:44: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:45: Lost braces in \itemize; meant \describe ? checkRd: (-1) compute_feat_inertia.Rd:51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) compute_feat_inertia.Rd:52: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) compute_feat_inertia.Rd:53: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) compute_feat_inertia.Rd:57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) compute_feat_inertia.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) compute_feat_inertia.Rd:59: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_birdwing.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:24: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:36-37: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:38-39: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:40-41: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:42: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:43: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:49-50: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:51-52: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:53-54: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:55-56: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:57-58: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:64-66: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:67-68: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:69-70: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:71-72: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:73-74: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:75-76: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:77-78: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:79: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:87-88: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:89: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:94: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:95: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:96: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:97: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:98-99: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:100: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:101-102: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:103-104: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:105: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:106-107: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:112: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:113: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:114: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:118: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:119: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_birdwing.Rd:120: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_bones.Rd:29-30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_bones.Rd:31-32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_bones.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_feathers.Rd:49-51: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_feathers.Rd:52-54: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_feathers.Rd:55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_head.Rd:25-26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_head.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_head.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_muscles.Rd:25-26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_muscles.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_muscles.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_neck.Rd:23: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_neck.Rd:24: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_neck.Rd:25: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_pm.Rd:18-19: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_pm.Rd:20-21: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_pm.Rd:22: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_restbody.Rd:14: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:17: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:23-24: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:26: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:27: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:30: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:31: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:32: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:33: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:34: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:35: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:36: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:37: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:38: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:39-40: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:41-42: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:43-44: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:45-46: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_restbody.Rd:47-48: Lost braces in \itemize; meant \describe ? checkRd: (-1) massprop_skin.Rd:29-30: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_skin.Rd:31-32: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_skin.Rd:33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_tail.Rd:25-26: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_tail.Rd:27-28: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_tail.Rd:29: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_torso.Rd:54-55: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_torso.Rd:56-57: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) massprop_torso.Rd:58: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) plot_CGloc.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:24: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:25: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:26-27: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:28: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:29: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:30-31: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:32-33: Lost braces in \itemize; meant \describe ? checkRd: (-1) plot_CGloc.Rd:34-35: Lost braces in \itemize; meant \describe ? checkRd: (-1) store_data.Rd:13: Lost braces in \itemize; meant \describe ? checkRd: (-1) store_data.Rd:14: Lost braces in \itemize; meant \describe ? checkRd: (-1) store_data.Rd:15: Lost braces in \itemize; meant \describe ? checkRd: (-1) store_data.Rd:16: Lost braces in \itemize; meant \describe ? checkRd: (-1) store_data.Rd:22: Lost braces in \itemize; meant \describe ? checkRd: (-1) store_data.Rd:23: Lost braces in \itemize; meant \describe ? checkRd: (-1) structural2VRP_feat.Rd:31-33: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) structural2VRP_feat.Rd:34-36: Lost braces in \itemize; \value handles \item{}{} directly checkRd: (-1) structural2VRP_feat.Rd:37: Lost braces in \itemize; \value handles \item{}{} directly * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [130s/154s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [11s/14s] OK * checking PDF version of manual ... [12s/17s] OK * checking HTML version of manual ... OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs