• using R Under development (unstable) (2013-06-16 r62969)
• using platform: x86_64-unknown-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘intamapInteractive/DESCRIPTION’ ... OK
• this is package ‘intamapInteractive’ version ‘1.1-7’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘intamapInteractive’ can be installed ... OK
• checking installed package size ... OK
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking for unstated dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... OK
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking examples ... [6s/6s] OK
• checking for unstated dependencies in tests ... OK
• checking tests ... [37s/37s] OK
  Running ‘anisotropyChoice.R’ [5s/5s]
  Comparing ‘anisotropyChoice.Rout’ to ‘anisotropyChoice.Rout.save’ ...5c5
  < This is mgcv 1.7-24. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
  7c7
  < spatstat 1.31-3
  ---
  > spatstat 1.31-1
  Running ‘biasCorr.R’ [5s/5s]
  Comparing ‘biasCorr.Rout’ to ‘biasCorr.Rout.save’ ...5c5
  < This is mgcv 1.7-24. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
  7c7
  < spatstat 1.31-3
  ---
  > spatstat 1.31-1
  Running ‘findLocalBias.R’ [4s/4s]
  Comparing ‘findLocalBias.Rout’ to ‘findLocalBias.Rout.save’ ...6c6
  < This is mgcv 1.7-24. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
  8c8
  < spatstat 1.31-3
  ---
  > spatstat 1.31-1
  Running ‘findRegionalBias.R’ [5s/5s]
  Comparing ‘findRegionalBias.Rout’ to ‘findRegionalBias.Rout.save’ ...6c6
  < This is mgcv 1.7-24. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
  8c8
  < spatstat 1.31-3
  ---
  > spatstat 1.31-1
  Running ‘optimizingTest.R’ [18s/18s]
  Comparing ‘optimizingTest.Rout’ to ‘optimizingTest.Rout.save’ ...9c9
  < This is mgcv 1.7-24. For overview type 'help("mgcv-package")'.
  ---
  > This is mgcv 1.7-22. For overview type 'help("mgcv-package")'.
  11c11
  < spatstat 1.31-3
  ---
  > spatstat 1.31-1
  162,163c162,166
  < Warning message:
  < (Nearly) coinciding points have been removed.
  ---
  > Warning messages:
  > 1: '.local' is deprecated.
  > Use 'over' instead.
  > See help("Deprecated") and help("sp-deprecated").
  > 2: (Nearly) coinciding points have been removed.
• checking PDF version of manual ... OK