• using R Under development (unstable) (2013-05-20 r62767)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘igraph/DESCRIPTION’ ... OK
  • this is package ‘igraph’ version ‘0.6.5-1’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘igraph’ can be installed ... OK
  • checking installed package size ... NOTE
    installed size is 16.9Mb
    sub-directories of 1Mb or more:
    libs 15.5Mb
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... NOTE
    File
    LICENSE
    is not mentioned in the DESCRIPTION file.
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking line endings in C/C++/Fortran sources/headers ... OK
  • checking line endings in Makefiles ... OK
  • checking for portable compilation flags in Makevars ... OK
  • checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
  • checking compiled code ... OK
  • checking examples ... ERROR
    Running examples in ‘igraph-Ex.R’ failed
    The error most likely occurred in:

    > ### Name: arpack
    > ### Title: ARPACK eigenvector calculation
    > ### Aliases: arpack arpack-options igraph.arpack.default
    > ### arpack.unpack.complex
    > ### Keywords: graphs
    >
    > ### ** Examples
    >
    > # Identity matrix
    > f <- function(x, extra=NULL) x
    > arpack(f, options=list(n=10, nev=2, ncv=4), sym=TRUE)
    $values
    [1] 1 1

    $vectors
    [,1] [,2]
    [1,] 0.2274989842 0.307877188
    [2,] 0.0004972365 0.501254294
    [3,] -0.5304409145 -0.256133216
    [4,] -0.5269035156 -0.326184129
    [5,] 0.0676021922 -0.214745214
    [6,] -0.1722450184 0.311066150
    [7,] 0.5195796090 -0.476132072
    [8,] -0.1439758535 -0.004549977
    [9,] 0.1909978227 -0.040144947
    [10,] -0.1668487307 0.332781812

    $options
    $options$bmat
    [1] "I"

    $options$n
    [1] 10

    $options$which
    [1] "XX"

    $options$nev
    [1] 2

    $options$tol
    [1] 0

    $options$ncv
    [1] 4

    $options$ldv
    [1] 0

    $options$ishift
    [1] 1

    $options$maxiter
    [1] 3000

    $options$nb
    [1] 1

    $options$mode
    [1] 1

    $options$start
    [1] 0

    $options$sigma
    [1] 0

    $options$sigmai
    [1] 0

    $options$info
    [1] 0

    $options$iter
    [1] 1

    $options$nconv
    [1] 2

    $options$numop
    [1] 4

    $options$numopb
    [1] 0

    $options$numreo
    [1] 4


    >
    > # Graph laplacian of a star graph (undirected), n>=2
    > # Note that this is a linear operation
    > f <- function(x, extra=NULL) {
    + y <- x
    + y[1] <- (length(x)-1)*x[1] - sum(x[-1])
    + for (i in 2:length(x)) {
    + y[i] <- x[i] - x[1]
    + }
    + y
    + }
    >
    > arpack(f, options=list(n=10, nev=1, ncv=3), sym=TRUE)
    At line 212 of file dseupd.f
    Fortran runtime error: Actual string length is shorter than the declared one for dummy argument 'howmny' (-1/1)