- using R Under development (unstable) (2013-05-20 r62767)
- using platform: x86_64-unknown-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘igraph/DESCRIPTION’ ... OK
- this is package ‘igraph’ version ‘0.6.5-1’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking whether package ‘igraph’ can be installed ... OK
- checking installed package size ... NOTE
installed size is 16.9Mb
sub-directories of 1Mb or more:
libs 15.5Mb
- checking package directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... NOTE
File
LICENSE
is not mentioned in the DESCRIPTION file.
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking for unstated dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... OK
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking for portable compilation flags in Makevars ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking compiled code ... OK
- checking examples ... ERROR
Running examples in ‘igraph-Ex.R’ failed
The error most likely occurred in:
> ### Name: arpack
> ### Title: ARPACK eigenvector calculation
> ### Aliases: arpack arpack-options igraph.arpack.default
> ### arpack.unpack.complex
> ### Keywords: graphs
>
> ### ** Examples
>
> # Identity matrix
> f <- function(x, extra=NULL) x
> arpack(f, options=list(n=10, nev=2, ncv=4), sym=TRUE)
$values
[1] 1 1
$vectors
[,1] [,2]
[1,] 0.2274989842 0.307877188
[2,] 0.0004972365 0.501254294
[3,] -0.5304409145 -0.256133216
[4,] -0.5269035156 -0.326184129
[5,] 0.0676021922 -0.214745214
[6,] -0.1722450184 0.311066150
[7,] 0.5195796090 -0.476132072
[8,] -0.1439758535 -0.004549977
[9,] 0.1909978227 -0.040144947
[10,] -0.1668487307 0.332781812
$options
$options$bmat
[1] "I"
$options$n
[1] 10
$options$which
[1] "XX"
$options$nev
[1] 2
$options$tol
[1] 0
$options$ncv
[1] 4
$options$ldv
[1] 0
$options$ishift
[1] 1
$options$maxiter
[1] 3000
$options$nb
[1] 1
$options$mode
[1] 1
$options$start
[1] 0
$options$sigma
[1] 0
$options$sigmai
[1] 0
$options$info
[1] 0
$options$iter
[1] 1
$options$nconv
[1] 2
$options$numop
[1] 4
$options$numopb
[1] 0
$options$numreo
[1] 4
>
> # Graph laplacian of a star graph (undirected), n>=2
> # Note that this is a linear operation
> f <- function(x, extra=NULL) {
+ y <- x
+ y[1] <- (length(x)-1)*x[1] - sum(x[-1])
+ for (i in 2:length(x)) {
+ y[i] <- x[i] - x[1]
+ }
+ y
+ }
>
> arpack(f, options=list(n=10, nev=1, ncv=3), sym=TRUE)
At line 212 of file dseupd.f
Fortran runtime error: Actual string length is shorter than the declared one for dummy argument 'howmny' (-1/1)