• using R Under development (unstable) (2013-06-16 r62969)
  • using platform: x86_64-unknown-linux-gnu (64-bit)
  • using session charset: UTF-8
  • checking for file ‘fpc/DESCRIPTION’ ... OK
  • this is package ‘fpc’ version ‘2.1-5’
  • checking package namespace information ... OK
  • checking package dependencies ... OK
  • checking if this is a source package ... OK
  • checking if there is a namespace ... OK
  • checking for executable files ... OK
  • checking for hidden files and directories ... OK
  • checking for portable file names ... OK
  • checking for sufficient/correct file permissions ... OK
  • checking whether package ‘fpc’ can be installed ... OK
  • checking installed package size ... OK
  • checking package directory ... OK
  • checking DESCRIPTION meta-information ... OK
  • checking top-level files ... OK
  • checking for left-over files ... OK
  • checking index information ... OK
  • checking package subdirectories ... OK
  • checking R files for non-ASCII characters ... OK
  • checking R files for syntax errors ... OK
  • checking whether the package can be loaded ... OK
  • checking whether the package can be loaded with stated dependencies ... OK
  • checking whether the package can be unloaded cleanly ... OK
  • checking whether the namespace can be loaded with stated dependencies ... OK
  • checking whether the namespace can be unloaded cleanly ... OK
  • checking loading without being on the library search path ... OK
  • checking for unstated dependencies in R code ... OK
  • checking S3 generic/method consistency ... OK
  • checking replacement functions ... OK
  • checking foreign function calls ... OK
  • checking R code for possible problems ... OK
  • checking Rd files ... OK
  • checking Rd metadata ... OK
  • checking Rd cross-references ... OK
  • checking for missing documentation entries ... OK
  • checking for code/documentation mismatches ... OK
  • checking Rd \usage sections ... OK
  • checking Rd contents ... OK
  • checking for unstated dependencies in examples ... OK
  • checking contents of ‘data’ directory ... OK
  • checking data for non-ASCII characters ... OK
  • checking data for ASCII and uncompressed saves ... OK
  • checking examples ... [7s/7s] OK
  • checking differences from ‘fpc-Ex.Rout’ to ‘fpc-Ex.Rout.save’ ...
    2c2
    < Package 'mclust' version 4.1
    ---
    > Package 'mclust' version 4.0
    4c4
    < > base::assign(".oldSearch", base::search(), pos = 'CheckExEnv')
    ---
    > > assign(".oldSearch", search(), pos = 'CheckExEnv')
    274,276d273
    <
    < detaching 'package:mvtnorm'
    <
    562,564d558
    <
    < detaching 'package:mvtnorm'
    <
    1041,1043d1034
    <
    < detaching 'package:mvtnorm'
    <
    1516,1518d1506
    <
    < detaching 'package:mvtnorm'
    <
    1590c1578
    < The following object is masked from 'package:fpc':
    ---
    > The following object(s) are masked from 'package:fpc':
    2104,2106d2091
    <
    < detaching 'package:mvtnorm'
    <
    2529,2531d2513
    <
    < detaching 'package:mvtnorm'
    <
    2551,2553d2532
    <
    < detaching 'package:mvtnorm'
    <
    2683,2685d2661
    <
    < detaching 'package:mvtnorm'
    <
    2703,2705d2678
    <
    < detaching 'package:mvtnorm'
    <
    2929c2902
    < The following object is masked from 'package:fpc':
    ---
    > The following object(s) are masked from 'package:fpc':
    2939c2912
    < detaching 'package:mvtnorm', 'package:prabclus'
    ---
    > detaching 'package:prabclus'
    OK
  • checking for unstated dependencies in tests ... OK
  • checking tests ... [15s/15s] OK
    Running ‘fpctests.R’ [15s/15s]
    Comparing ‘fpctests.Rout’ to ‘fpctests.Rout.save’ ...6c6
    < Package 'mclust' version 4.1
    ---
    > Package 'mclust' version 4.0
    597c597
    < The following object is masked from 'package:fpc':
    ---
    > The following object(s) are masked from 'package:fpc':
    611,613d610
    < Top 3 models based on the BIC criterion:
    < VVV,4 VVV,3 VVV,2
    < -453.6662 -457.6362 -473.0819
    685,687d681
    < Top 3 models based on the BIC criterion:
    < EEE,5
    < -439.4828
    883c877
    < The following object is masked from 'package:flexmix':
    ---
    > The following object(s) are masked from 'package:modeltools':
    1112,1113c1106,1107
    < [1,] 8 0.13861386
    < [2,] 7 0.68316832
    ---
    > [1,] 8 0.17821782
    > [2,] 7 0.65346535
  • checking PDF version of manual ... OK