* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘spAbundance’ ... ** package ‘spAbundance’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpdr0HYs/R.INSTALL2a1df51f28613d/spAbundance/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c DS.cpp -o DS.o DS.cpp: In function ‘SEXPREC* DS(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: DS.cpp:773:36: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 773 | &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ DS.cpp:203:10: note: ‘sigmaSqPSamples_r’ was declared here 203 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ DS.cpp:775:36: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 775 | &REAL(alphaStarSamples_r)[sPost*nDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ DS.cpp:204:10: note: ‘alphaStarSamples_r’ was declared here 204 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ DS.cpp:767:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 767 | &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ DS.cpp:212:10: note: ‘sigmaSqMuSamples_r’ was declared here 212 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ DS.cpp:769:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 769 | &REAL(betaStarSamples_r)[sPost*nAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ DS.cpp:213:10: note: ‘betaStarSamples_r’ was declared here 213 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ DS.cpp:867:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 867 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ DS.cpp:235:12: note: ‘tmp_0’ was declared here 235 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c NMix.cpp -o NMix.o NMix.cpp: In function ‘SEXPREC* NMix(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: NMix.cpp:615:36: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 615 | &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ NMix.cpp:200:10: note: ‘sigmaSqPSamples_r’ was declared here 200 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ NMix.cpp:617:36: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 617 | &REAL(alphaStarSamples_r)[sPost*nDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ NMix.cpp:201:10: note: ‘alphaStarSamples_r’ was declared here 201 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ NMix.cpp:609:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 609 | &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ NMix.cpp:209:10: note: ‘sigmaSqMuSamples_r’ was declared here 209 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ NMix.cpp:611:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 611 | &REAL(betaStarSamples_r)[sPost*nAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ NMix.cpp:210:10: note: ‘betaStarSamples_r’ was declared here 210 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ NMix.cpp:707:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 707 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ NMix.cpp:221:12: note: ‘tmp_0’ was declared here 221 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c abund.cpp -o abund.o abund.cpp: In function ‘SEXPREC* abund(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: abund.cpp:410:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 410 | &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ abund.cpp:168:10: note: ‘sigmaSqMuSamples_r’ was declared here 168 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ abund.cpp:412:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 412 | &REAL(betaStarSamples_r)[sPost*nAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ abund.cpp:169:10: note: ‘betaStarSamples_r’ was declared here 169 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c abundGaussian.cpp -o abundGaussian.o abundGaussian.cpp: In function ‘SEXPREC* abundGaussian(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: abundGaussian.cpp:370:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 370 | &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ abundGaussian.cpp:163:10: note: ‘sigmaSqMuSamples_r’ was declared here 163 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ abundGaussian.cpp:372:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 372 | &REAL(betaStarSamples_r)[sPost*nRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ abundGaussian.cpp:164:10: note: ‘betaStarSamples_r’ was declared here 164 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c checkAlphaDS.cpp -o checkAlphaDS.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c checkMSAlphaDS.cpp -o checkMSAlphaDS.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c idist.cpp -o idist.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lfMsAbund.cpp -o lfMsAbund.o lfMsAbund.cpp: In function ‘SEXPREC* lfMsAbund(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: lfMsAbund.cpp:720:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 720 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ lfMsAbund.cpp:219:10: note: ‘sigmaSqMuSamples_r’ was declared here 219 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ lfMsAbund.cpp:721:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 721 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ lfMsAbund.cpp:220:10: note: ‘betaStarSamples_r’ was declared here 220 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ lfMsAbund.cpp:806:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 806 | SET_VECTOR_ELT(result_r, tmp_0, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lfMsAbund.cpp:228:10: note: ‘kappaSamples_r’ was declared here 228 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lfMsAbundGaussian.cpp -o lfMsAbundGaussian.o lfMsAbundGaussian.cpp: In function ‘SEXPREC* lfMsAbundGaussian(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: lfMsAbundGaussian.cpp:679:59: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 679 | F77_NAME(dcopy)(&pRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ lfMsAbundGaussian.cpp:243:10: note: ‘sigmaSqMuSamples_r’ was declared here 243 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ lfMsAbundGaussian.cpp:680:59: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 680 | F77_NAME(dcopy)(&nREN, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nREN], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ lfMsAbundGaussian.cpp:244:10: note: ‘betaStarSamples_r’ was declared here 244 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lfMsDS.cpp -o lfMsDS.o lfMsDS.cpp: In function ‘SEXPREC* lfMsDS(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: lfMsDS.cpp:1152:61: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1152 | F77_NAME(dcopy)(&pDetRE, sigmaSqP, &inc, &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ lfMsDS.cpp:277:10: note: ‘sigmaSqPSamples_r’ was declared here 277 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ lfMsDS.cpp:1153:65: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1153 | F77_NAME(dcopy)(&nDetREnSp, alphaStar, &inc, &REAL(alphaStarSamples_r)[sPost*nDetREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ lfMsDS.cpp:278:10: note: ‘alphaStarSamples_r’ was declared here 278 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ lfMsDS.cpp:1156:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1156 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ lfMsDS.cpp:286:10: note: ‘sigmaSqMuSamples_r’ was declared here 286 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ lfMsDS.cpp:1157:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1157 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ lfMsDS.cpp:287:10: note: ‘betaStarSamples_r’ was declared here 287 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ lfMsDS.cpp:1259:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1259 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lfMsDS.cpp:294:10: note: ‘kappaSamples_r’ was declared here 294 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ lfMsDS.cpp:1255:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1255 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ lfMsDS.cpp:185:12: note: ‘tmp_0’ was declared here 185 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c lfMsNMix.cpp -o lfMsNMix.o lfMsNMix.cpp: In function ‘SEXPREC* lfMsNMix(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: lfMsNMix.cpp:1013:61: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1013 | F77_NAME(dcopy)(&pDetRE, sigmaSqP, &inc, &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:270:10: note: ‘sigmaSqPSamples_r’ was declared here 270 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ lfMsNMix.cpp:1014:65: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1014 | F77_NAME(dcopy)(&nDetREnSp, alphaStar, &inc, &REAL(alphaStarSamples_r)[sPost*nDetREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:271:10: note: ‘alphaStarSamples_r’ was declared here 271 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:1017:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1017 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:279:10: note: ‘sigmaSqMuSamples_r’ was declared here 279 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:1018:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1018 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:280:10: note: ‘betaStarSamples_r’ was declared here 280 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ lfMsNMix.cpp:1115:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1115 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ lfMsNMix.cpp:287:10: note: ‘kappaSamples_r’ was declared here 287 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ lfMsNMix.cpp:1111:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1111 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ lfMsNMix.cpp:178:12: note: ‘tmp_0’ was declared here 178 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c mkSpCov.cpp -o mkSpCov.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c msAbund.cpp -o msAbund.o msAbund.cpp: In function ‘SEXPREC* msAbund(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: msAbund.cpp:526:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 526 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ msAbund.cpp:199:10: note: ‘sigmaSqMuSamples_r’ was declared here 199 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ msAbund.cpp:527:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 527 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ msAbund.cpp:200:10: note: ‘betaStarSamples_r’ was declared here 200 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ msAbund.cpp:610:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 610 | SET_VECTOR_ELT(result_r, tmp_0, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ msAbund.cpp:208:10: note: ‘kappaSamples_r’ was declared here 208 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c msAbundGaussian.cpp -o msAbundGaussian.o msAbundGaussian.cpp: In function ‘SEXPREC* msAbundGaussian(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: msAbundGaussian.cpp:499:59: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 499 | F77_NAME(dcopy)(&pRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ msAbundGaussian.cpp:217:10: note: ‘sigmaSqMuSamples_r’ was declared here 217 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ msAbundGaussian.cpp:500:59: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 500 | F77_NAME(dcopy)(&nREN, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nREN], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ msAbundGaussian.cpp:218:10: note: ‘betaStarSamples_r’ was declared here 218 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c msDS.cpp -o msDS.o msDS.cpp: In function ‘SEXPREC* msDS(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: msDS.cpp:966:61: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 966 | F77_NAME(dcopy)(&pDetRE, sigmaSqP, &inc, &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ msDS.cpp:258:10: note: ‘sigmaSqPSamples_r’ was declared here 258 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ msDS.cpp:967:65: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 967 | F77_NAME(dcopy)(&nDetREnSp, alphaStar, &inc, &REAL(alphaStarSamples_r)[sPost*nDetREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ msDS.cpp:259:10: note: ‘alphaStarSamples_r’ was declared here 259 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ msDS.cpp:970:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 970 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ msDS.cpp:267:10: note: ‘sigmaSqMuSamples_r’ was declared here 267 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ msDS.cpp:971:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 971 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ msDS.cpp:268:10: note: ‘betaStarSamples_r’ was declared here 268 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ msDS.cpp:1071:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1071 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ msDS.cpp:275:10: note: ‘kappaSamples_r’ was declared here 275 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ msDS.cpp:1067:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1067 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ msDS.cpp:179:12: note: ‘tmp_0’ was declared here 179 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c msNMix.cpp -o msNMix.o msNMix.cpp: In function ‘SEXPREC* msNMix(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: msNMix.cpp:829:61: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 829 | F77_NAME(dcopy)(&pDetRE, sigmaSqP, &inc, &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ msNMix.cpp:250:10: note: ‘sigmaSqPSamples_r’ was declared here 250 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ msNMix.cpp:830:65: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 830 | F77_NAME(dcopy)(&nDetREnSp, alphaStar, &inc, &REAL(alphaStarSamples_r)[sPost*nDetREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ msNMix.cpp:251:10: note: ‘alphaStarSamples_r’ was declared here 251 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ msNMix.cpp:833:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 833 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ msNMix.cpp:259:10: note: ‘sigmaSqMuSamples_r’ was declared here 259 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ msNMix.cpp:834:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 834 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ msNMix.cpp:260:10: note: ‘betaStarSamples_r’ was declared here 260 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ msNMix.cpp:929:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 929 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ msNMix.cpp:267:10: note: ‘kappaSamples_r’ was declared here 267 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ msNMix.cpp:925:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 925 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ msNMix.cpp:171:12: note: ‘tmp_0’ was declared here 171 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nn.cpp -o nn.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c rpg.cpp -o rpg.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sfMsAbundGaussianNNGP.cpp -o sfMsAbundGaussianNNGP.o sfMsAbundGaussianNNGP.cpp: In function ‘SEXPREC* sfMsAbundGaussianNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: sfMsAbundGaussianNNGP.cpp:942:53: warning: ‘yRepSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 942 | F77_NAME(dcopy)(&JN, yRep, &inc, &REAL(yRepSamples_r)[sPost*JN], &inc); | ~~~~^~~~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:300:10: note: ‘yRepSamples_r’ was declared here 300 | SEXP yRepSamples_r; | ^~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:941:51: warning: ‘muSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 941 | F77_NAME(dcopy)(&JN, mu, &inc, &REAL(muSamples_r)[sPost*JN], &inc); | ~~~~^~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:301:10: note: ‘muSamples_r’ was declared here 301 | SEXP muSamples_r; | ^~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:943:53: warning: ‘likeSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 943 | F77_NAME(dcopy)(&JN, like, &inc, &REAL(likeSamples_r)[sPost*JN], &inc); | ~~~~^~~~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:302:10: note: ‘likeSamples_r’ was declared here 302 | SEXP likeSamples_r; | ^~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:948:59: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 948 | F77_NAME(dcopy)(&pRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:319:10: note: ‘sigmaSqMuSamples_r’ was declared here 319 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:949:59: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 949 | F77_NAME(dcopy)(&nREN, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nREN], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ sfMsAbundGaussianNNGP.cpp:320:10: note: ‘betaStarSamples_r’ was declared here 320 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sfMsAbundNNGP.cpp -o sfMsAbundNNGP.o sfMsAbundNNGP.cpp: In function ‘SEXPREC* sfMsAbundNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: sfMsAbundNNGP.cpp:995:58: warning: ‘yRepSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 995 | F77_NAME(dcopy)(&nObsnSp, yRep, &inc, &REAL(yRepSamples_r)[sPost*nObsnSp], &inc); | ~~~~^~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:268:10: note: ‘yRepSamples_r’ was declared here 268 | SEXP yRepSamples_r; | ^~~~~~~~~~~~~ sfMsAbundNNGP.cpp:996:56: warning: ‘muSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 996 | F77_NAME(dcopy)(&nObsnSp, mu, &inc, &REAL(muSamples_r)[sPost*nObsnSp], &inc); | ~~~~^~~~~~~~~~~~~ sfMsAbundNNGP.cpp:269:10: note: ‘muSamples_r’ was declared here 269 | SEXP muSamples_r; | ^~~~~~~~~~~ sfMsAbundNNGP.cpp:997:58: warning: ‘likeSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 997 | F77_NAME(dcopy)(&nObsnSp, like, &inc, &REAL(likeSamples_r)[sPost*nObsnSp], &inc); | ~~~~^~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:270:10: note: ‘likeSamples_r’ was declared here 270 | SEXP likeSamples_r; | ^~~~~~~~~~~~~ sfMsAbundNNGP.cpp:1004:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1004 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:287:10: note: ‘sigmaSqMuSamples_r’ was declared here 287 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:1005:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1005 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:288:10: note: ‘betaStarSamples_r’ was declared here 288 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:1097:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1097 | SET_VECTOR_ELT(result_r, tmp_0, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sfMsAbundNNGP.cpp:296:10: note: ‘kappaSamples_r’ was declared here 296 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sfMsAbundNNGPPredict.cpp -o sfMsAbundNNGPPredict.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sfMsDSNNGP.cpp -o sfMsDSNNGP.o sfMsDSNNGP.cpp: In function ‘SEXPREC* sfMsDSNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: sfMsDSNNGP.cpp:1428:61: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1428 | F77_NAME(dcopy)(&pDetRE, sigmaSqP, &inc, &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:341:10: note: ‘sigmaSqPSamples_r’ was declared here 341 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:1429:65: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1429 | F77_NAME(dcopy)(&nDetREnSp, alphaStar, &inc, &REAL(alphaStarSamples_r)[sPost*nDetREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:342:10: note: ‘alphaStarSamples_r’ was declared here 342 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:1432:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1432 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:350:10: note: ‘sigmaSqMuSamples_r’ was declared here 350 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:1433:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1433 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:351:10: note: ‘betaStarSamples_r’ was declared here 351 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:1542:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1542 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sfMsDSNNGP.cpp:358:10: note: ‘kappaSamples_r’ was declared here 358 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ sfMsDSNNGP.cpp:1538:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1538 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ sfMsDSNNGP.cpp:243:12: note: ‘tmp_0’ was declared here 243 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sfMsNMixNNGP.cpp -o sfMsNMixNNGP.o sfMsNMixNNGP.cpp: In function ‘SEXPREC* sfMsNMixNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: sfMsNMixNNGP.cpp:1289:61: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1289 | F77_NAME(dcopy)(&pDetRE, sigmaSqP, &inc, &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:335:10: note: ‘sigmaSqPSamples_r’ was declared here 335 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:1290:65: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1290 | F77_NAME(dcopy)(&nDetREnSp, alphaStar, &inc, &REAL(alphaStarSamples_r)[sPost*nDetREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:336:10: note: ‘alphaStarSamples_r’ was declared here 336 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:1293:64: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1293 | F77_NAME(dcopy)(&pAbundRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:344:10: note: ‘sigmaSqMuSamples_r’ was declared here 344 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:1294:66: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1294 | F77_NAME(dcopy)(&nAbundREnSp, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nAbundREnSp], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:345:10: note: ‘betaStarSamples_r’ was declared here 345 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:1398:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1398 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:352:10: note: ‘kappaSamples_r’ was declared here 352 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ sfMsNMixNNGP.cpp:1394:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1394 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ sfMsNMixNNGP.cpp:237:12: note: ‘tmp_0’ was declared here 237 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c sfMsNMixNNGPPredict.cpp -o sfMsNMixNNGPPredict.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c spAbundGaussianNNGP.cpp -o spAbundGaussianNNGP.o spAbundGaussianNNGP.cpp: In function ‘SEXPREC* spAbundGaussianNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: spAbundGaussianNNGP.cpp:662:52: warning: ‘yRepSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 662 | F77_NAME(dcopy)(&J, yRep, &inc, &REAL(yRepSamples_r)[sPost*J], &inc); | ~~~~^~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:229:10: note: ‘yRepSamples_r’ was declared here 229 | SEXP yRepSamples_r; | ^~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:663:60: warning: ‘yRepZeroSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 663 | F77_NAME(dcopy)(&JZero, yRepZero, &inc, &REAL(yRepZeroSamples_r)[sPost*JZero], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:230:10: note: ‘yRepZeroSamples_r’ was declared here 230 | SEXP yRepZeroSamples_r; | ^~~~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:664:50: warning: ‘muSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 664 | F77_NAME(dcopy)(&J, mu, &inc, &REAL(muSamples_r)[sPost*J], &inc); | ~~~~^~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:231:10: note: ‘muSamples_r’ was declared here 231 | SEXP muSamples_r; | ^~~~~~~~~~~ spAbundGaussianNNGP.cpp:666:36: warning: ‘likeSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 666 | &REAL(likeSamples_r)[sPost*J], &inc); | ~~~~^~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:232:10: note: ‘likeSamples_r’ was declared here 232 | SEXP likeSamples_r; | ^~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:670:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 670 | &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:247:10: note: ‘sigmaSqMuSamples_r’ was declared here 247 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:672:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 672 | &REAL(betaStarSamples_r)[sPost*nRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spAbundGaussianNNGP.cpp:248:10: note: ‘betaStarSamples_r’ was declared here 248 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c spAbundNNGP.cpp -o spAbundNNGP.o spAbundNNGP.cpp: In function ‘SEXPREC* spAbundNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: spAbundNNGP.cpp:759:55: warning: ‘yRepSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 759 | F77_NAME(dcopy)(&nObs, yRep, &inc, &REAL(yRepSamples_r)[sPost*nObs], &inc); | ~~~~^~~~~~~~~~~~~~~ spAbundNNGP.cpp:222:10: note: ‘yRepSamples_r’ was declared here 222 | SEXP yRepSamples_r; | ^~~~~~~~~~~~~ spAbundNNGP.cpp:758:53: warning: ‘muSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 758 | F77_NAME(dcopy)(&nObs, mu, &inc, &REAL(muSamples_r)[sPost*nObs], &inc); | ~~~~^~~~~~~~~~~~~ spAbundNNGP.cpp:223:10: note: ‘muSamples_r’ was declared here 223 | SEXP muSamples_r; | ^~~~~~~~~~~ spAbundNNGP.cpp:761:36: warning: ‘likeSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 761 | &REAL(likeSamples_r)[sPost*nObs], &inc); | ~~~~^~~~~~~~~~~~~~~ spAbundNNGP.cpp:224:10: note: ‘likeSamples_r’ was declared here 224 | SEXP likeSamples_r; | ^~~~~~~~~~~~~ spAbundNNGP.cpp:860:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 860 | SET_VECTOR_ELT(result_r, tmp_0, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spAbundNNGP.cpp:236:10: note: ‘kappaSamples_r’ was declared here 236 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ spAbundNNGP.cpp:770:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 770 | &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ spAbundNNGP.cpp:242:10: note: ‘sigmaSqMuSamples_r’ was declared here 242 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ spAbundNNGP.cpp:772:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 772 | &REAL(betaStarSamples_r)[sPost*nAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spAbundNNGP.cpp:243:10: note: ‘betaStarSamples_r’ was declared here 243 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c spAbundNNGPPredict.cpp -o spAbundNNGPPredict.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c spDSNNGP.cpp -o spDSNNGP.o spDSNNGP.cpp: In function ‘SEXPREC* spDSNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: spDSNNGP.cpp:1234:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1234 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:260:10: note: ‘kappaSamples_r’ was declared here 260 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ spDSNNGP.cpp:1127:36: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1127 | &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:272:10: note: ‘sigmaSqPSamples_r’ was declared here 272 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ spDSNNGP.cpp:1129:36: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1129 | &REAL(alphaStarSamples_r)[sPost*nDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:273:10: note: ‘alphaStarSamples_r’ was declared here 273 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:1121:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1121 | &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:281:10: note: ‘sigmaSqMuSamples_r’ was declared here 281 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:1123:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1123 | &REAL(betaStarSamples_r)[sPost*nAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spDSNNGP.cpp:282:10: note: ‘betaStarSamples_r’ was declared here 282 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ spDSNNGP.cpp:1230:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1230 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ spDSNNGP.cpp:304:12: note: ‘tmp_0’ was declared here 304 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c spNMixNNGP.cpp -o spNMixNNGP.o spNMixNNGP.cpp: In function ‘SEXPREC* spNMixNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: spNMixNNGP.cpp:1075:21: warning: ‘kappaSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1075 | SET_VECTOR_ELT(result_r, tmp_02, kappaSamples_r); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:258:10: note: ‘kappaSamples_r’ was declared here 258 | SEXP kappaSamples_r; | ^~~~~~~~~~~~~~ spNMixNNGP.cpp:975:36: warning: ‘sigmaSqPSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 975 | &REAL(sigmaSqPSamples_r)[sPost*pDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:270:10: note: ‘sigmaSqPSamples_r’ was declared here 270 | SEXP sigmaSqPSamples_r; | ^~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:977:36: warning: ‘alphaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 977 | &REAL(alphaStarSamples_r)[sPost*nDetRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:271:10: note: ‘alphaStarSamples_r’ was declared here 271 | SEXP alphaStarSamples_r; | ^~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:969:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 969 | &REAL(sigmaSqMuSamples_r)[sPost*pAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:279:10: note: ‘sigmaSqMuSamples_r’ was declared here 279 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:971:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 971 | &REAL(betaStarSamples_r)[sPost*nAbundRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:280:10: note: ‘betaStarSamples_r’ was declared here 280 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ spNMixNNGP.cpp:1071:16: warning: ‘tmp_0’ may be used uninitialized [-Wmaybe-uninitialized] 1071 | tmp_02 = tmp_0 + 2; | ~~~~~~~^~~~~~~~~~~ spNMixNNGP.cpp:291:12: note: ‘tmp_0’ was declared here 291 | double tmp_0, tmp_02; | ^~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c spNMixNNGPPredict.cpp -o spNMixNNGPPredict.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c svcAbundNNGP.cpp -o svcAbundNNGP.o svcAbundNNGP.cpp: In function ‘SEXPREC* svcAbundNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: svcAbundNNGP.cpp:713:34: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 713 | &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ svcAbundNNGP.cpp:243:10: note: ‘sigmaSqMuSamples_r’ was declared here 243 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ svcAbundNNGP.cpp:715:34: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 715 | &REAL(betaStarSamples_r)[sPost*nRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ svcAbundNNGP.cpp:244:10: note: ‘betaStarSamples_r’ was declared here 244 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ svcAbundNNGP.cpp:582:9: warning: ‘logDet’ may be used uninitialized [-Wmaybe-uninitialized] 582 | #pragma omp parallel for private (e, i, b) reduction(+:aa, logDet) | ^~~ svcAbundNNGP.cpp:330:12: note: ‘logDet’ was declared here 330 | double logDet; | ^~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c svcAbundNNGPPredict.cpp -o svcAbundNNGPPredict.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c svcMsAbundGaussianNNGP.cpp -o svcMsAbundGaussianNNGP.o svcMsAbundGaussianNNGP.cpp: In function ‘SEXPREC* svcMsAbundGaussianNNGP(SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP, SEXP)’: svcMsAbundGaussianNNGP.cpp:1030:59: warning: ‘sigmaSqMuSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1030 | F77_NAME(dcopy)(&pRE, sigmaSqMu, &inc, &REAL(sigmaSqMuSamples_r)[sPost*pRE], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~~ svcMsAbundGaussianNNGP.cpp:320:10: note: ‘sigmaSqMuSamples_r’ was declared here 320 | SEXP sigmaSqMuSamples_r; | ^~~~~~~~~~~~~~~~~~ svcMsAbundGaussianNNGP.cpp:1031:59: warning: ‘betaStarSamples_r’ may be used uninitialized [-Wmaybe-uninitialized] 1031 | F77_NAME(dcopy)(&nREN, betaStar, &inc, &REAL(betaStarSamples_r)[sPost*nREN], &inc); | ~~~~^~~~~~~~~~~~~~~~~~~ svcMsAbundGaussianNNGP.cpp:321:10: note: ‘betaStarSamples_r’ was declared here 321 | SEXP betaStarSamples_r; | ^~~~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c svcMsAbundGaussianNNGPPredict.cpp -o svcMsAbundGaussianNNGPPredict.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c util.cpp -o util.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c waicAbund.cpp -o waicAbund.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o spAbundance.so DS.o NMix.o abund.o abundGaussian.o checkAlphaDS.o checkMSAlphaDS.o idist.o init.o lfMsAbund.o lfMsAbundGaussian.o lfMsDS.o lfMsNMix.o mkSpCov.o msAbund.o msAbundGaussian.o msDS.o msNMix.o nn.o rpg.o sfMsAbundGaussianNNGP.o sfMsAbundNNGP.o sfMsAbundNNGPPredict.o sfMsDSNNGP.o sfMsNMixNNGP.o sfMsNMixNNGPPredict.o spAbundGaussianNNGP.o spAbundNNGP.o spAbundNNGPPredict.o spDSNNGP.o spNMixNNGP.o spNMixNNGPPredict.o svcAbundNNGP.o svcAbundNNGPPredict.o svcMsAbundGaussianNNGP.o svcMsAbundGaussianNNGPPredict.o util.o waicAbund.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpdr0HYs/R.INSTALL2a1df51f28613d/spAbundance/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpdr0HYs/R.INSTALL2a1df51f28613d/spAbundance/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpdr0HYs/R.INSTALL2a1df51f28613d/spAbundance/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-spAbundance/00new/spAbundance/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘spAbundance’ as ‘spAbundance_0.1.3_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (spAbundance)