* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘shrinkDSM’ ... ** package ‘shrinkDSM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIcdV4w/R.INSTALL1a3c562881da5e/shrinkDSM/src' g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -DARMA_WARN_LEVEL=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/stochvol/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/shrinkTVP/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -DARMA_WARN_LEVEL=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/stochvol/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/shrinkTVP/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c do_shrinkDSM.cpp -o do_shrinkDSM.o In file included from do_shrinkDSM.cpp:9: In function ‘double shrinkTVP::TG_MH_step(double, double, double, const arma::vec&, const arma::vec&, double, double, bool, double, double, bool, bool, arma::vec&, double&, double, double, int&, int, int&)’, inlined from ‘Rcpp::List do_shrinkDSM(arma::vec, arma::mat, std::string, arma::vec, arma::vec, arma::vec, int, int, int, double, double, double, double, arma::vec, bool, bool, double, double, bool, bool, double, double, bool, bool, double, double, bool, bool, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, bool, arma::vec, arma::vec, arma::vec, arma::ivec, bool, Rcpp::List)’ at do_shrinkDSM.cpp:744:45: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/shrinkTVP/include/shrinkTVP.h:238:16: warning: ‘e2_phi_samp’ may be used uninitialized [-Wmaybe-uninitialized] 238 | return func(current_val, | ~~~~^~~~~~~~~~~~~ 239 | c_tuning_par, | ~~~~~~~~~~~~~ 240 | scale_par, | ~~~~~~~~~~ 241 | scale_vec, | ~~~~~~~~~~ 242 | param_vec, | ~~~~~~~~~~ 243 | b, | ~~ 244 | nu, | ~~~ 245 | is_c, | ~~~~~ 246 | scale_scale, | ~~~~~~~~~~~~ 247 | other_hyp, | ~~~~~~~~~~ 248 | common_shrink_par, | ~~~~~~~~~~~~~~~~~~ 249 | adaptive, | ~~~~~~~~~ 250 | batch, | ~~~~~~ 251 | curr_sd, | ~~~~~~~~ 252 | target_rate, | ~~~~~~~~~~~~ 253 | max_adapt, | ~~~~~~~~~~ 254 | batch_nr, | ~~~~~~~~~ 255 | batch_size, | ~~~~~~~~~~~ 256 | batch_pos); | ~~~~~~~~~~ do_shrinkDSM.cpp: In function ‘Rcpp::List do_shrinkDSM(arma::vec, arma::mat, std::string, arma::vec, arma::vec, arma::vec, int, int, int, double, double, double, double, arma::vec, bool, bool, double, double, bool, bool, double, double, bool, bool, double, double, bool, bool, double, double, double, double, double, double, double, double, double, double, double, double, double, double, double, bool, arma::vec, arma::vec, arma::vec, arma::ivec, bool, Rcpp::List)’: do_shrinkDSM.cpp:418:10: note: ‘e2_phi_samp’ was declared here 418 | double e2_phi_samp; | ^~~~~~~~~~~ g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -DARMA_WARN_LEVEL=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/stochvol/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/shrinkTVP/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init.cpp -o init.o g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -DARMA_WARN_LEVEL=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/stochvol/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/shrinkTVP/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample_beta_McCausland.cpp -o sample_beta_McCausland.o g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -DSTRICT_R_HEADERS -DARMA_WARN_LEVEL=0 -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppProgress/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/stochvol/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/shrinkTVP/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c sample_parameters.cpp -o sample_parameters.o g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o shrinkDSM.so RcppExports.o do_shrinkDSM.o init.o sample_beta_McCausland.o sample_parameters.o -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIcdV4w/R.INSTALL1a3c562881da5e/shrinkDSM/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpIcdV4w/R.INSTALL1a3c562881da5e/shrinkDSM/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpIcdV4w/R.INSTALL1a3c562881da5e/shrinkDSM/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-shrinkDSM/00new/shrinkDSM/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘shrinkDSM’ as ‘shrinkDSM_0.2.0_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (shrinkDSM)