* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘psp’ ...
** package ‘psp’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbB2kEN/R.INSTALL1712a06cb7298a/psp/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c pspGlobal.cpp -o pspGlobal.o
pspGlobal.cpp: In function ‘arma::mat ClampParameters(arma::mat, arma::colvec, arma::colvec)’:
pspGlobal.cpp:29:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   29 |   for (int i = 0; i < upper.n_elem; i++) {
      |                   ~~^~~~~~~~~~~~~~
pspGlobal.cpp: In function ‘arma::cube OrdinalCompare(arma::cube, arma::cube)’:
pspGlobal.cpp:60:21: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   60 |   for (int x = 0; x < predicted.n_slices; x++) {
      |                   ~~^~~~~~~~~~~~~~~~~~~~
pspGlobal.cpp:62:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
   62 |     for (int y = 0; y < discovered.n_slices; y++) {
      |                     ~~^~~~~~~~~~~~~~~~~~~~~
pspGlobal.cpp: In function ‘void WriteFile(int, arma::mat, arma::vec, std::string)’:
pspGlobal.cpp:153:23: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
  153 |   for (uword i = 0; i < rows; i++) {
      |                     ~~^~~~~~
pspGlobal.cpp:156:25: warning: comparison of integer expressions of different signedness: ‘arma::uword’ {aka ‘unsigned int’} and ‘int’ [-Wsign-compare]
  156 |     for (uword k = 0; k < columns; k++) {
      |                       ~~^~~~~~~~~
pspGlobal.cpp: In function ‘Rcpp::List pspGlobal(Rcpp::Function, Rcpp::Function, Rcpp::List, bool, std::string, std::string, bool)’:
pspGlobal.cpp:196:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  196 |   if (dimensions != lower.n_elem || dimensions != upper.n_elem) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~~
pspGlobal.cpp:196:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare]
  196 |   if (dimensions != lower.n_elem || dimensions != upper.n_elem) {
      |                                     ~~~~~~~~~~~^~~~~~~~~~~~~~~
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o psp.so RcppExports.o pspGlobal.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbB2kEN/R.INSTALL1712a06cb7298a/psp/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbB2kEN/R.INSTALL1712a06cb7298a/psp/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbB2kEN/R.INSTALL1712a06cb7298a/psp/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-psp/00new/psp/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘psp’ as ‘psp_1.0.0_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (psp)