* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘psbcGroup’ ...
** package ‘psbcGroup’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQAv9iq/R.INSTALL19f6d968dcf95c/psbcGroup/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c BAFTgpLT.c -o BAFTgpLT.o
BAFTgpLT.c: In function ‘BAFTgpLTmcmc’:
BAFTgpLT.c:75:21: warning: ‘nP’ may be used uninitialized [-Wmaybe-uninitialized]
   75 |     gsl_matrix *X = gsl_matrix_calloc(*n, (nP));
      |                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~
BAFTgpLT.c:70:9: note: ‘nP’ was declared here
   70 |     int nP, nQ;
      |         ^~
BAFTgpLT.c:80:22: warning: ‘nQ’ may be used uninitialized [-Wmaybe-uninitialized]
   80 |     gsl_matrix *XC = gsl_matrix_calloc(*n, (nQ));
      |                      ^~~~~~~~~~~~~~~~~~~~~~~~~~~
BAFTgpLT.c:70:13: note: ‘nQ’ was declared here
   70 |     int nP, nQ;
      |             ^~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c BAFTgpLT_Updates.c -o BAFTgpLT_Updates.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c Utilities.c -o Utilities.o
Utilities.c: In function ‘c_multinom_sample’:
Utilities.c:62:5: warning: ‘<unknown>’ may be used uninitialized [-Wmaybe-uninitialized]
   62 |     gsl_ran_multinomial(rr, KK, 1, probK, samples);
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from Utilities.c:14:
/usr/include/gsl/gsl_randist.h:154:6: note: by argument 4 of type ‘const double[]’ to ‘gsl_ran_multinomial’ declared here
  154 | void gsl_ran_multinomial (const gsl_rng * r, const size_t K,
      |      ^~~~~~~~~~~~~~~~~~~
Utilities.c:69:12: warning: ‘val’ may be used uninitialized [-Wmaybe-uninitialized]
   69 |     return val;
      |            ^~~
Utilities.c:51:13: note: ‘val’ was declared here
   51 |     int ii, val;
      |             ^~~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c aftGL.c -o aftGL.o
aftGL.c: In function ‘aftGLmcmc’:
aftGL.c:87:27: warning: ‘nP’ may be used uninitialized [-Wmaybe-uninitialized]
   87 |     gsl_matrix *survCov = gsl_matrix_calloc(*n, nP);
      |                           ^~~~~~~~~~~~~~~~~~~~~~~~~
aftGL.c:82:9: note: ‘nP’ was declared here
   82 |     int nP;
      |         ^~
aftGL.c:200:29: warning: ‘subsize_last_temp’ may be used uninitialized [-Wmaybe-uninitialized]
  200 |     gsl_matrix *Xsub_last = gsl_matrix_calloc(*n, subsize_last_temp);
      |                             ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
aftGL.c:193:9: note: ‘subsize_last_temp’ was declared here
  193 |     int subsize_last_temp;
      |         ^~~~~~~~~~~~~~~~~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c registerDynamicSymbol.c -o registerDynamicSymbol.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o psbcGroup.so BAFTgpLT.o BAFTgpLT_Updates.o Utilities.o aftGL.o registerDynamicSymbol.o -L/usr/local/lib -lgsl -lgslcblas -lm -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQAv9iq/R.INSTALL19f6d968dcf95c/psbcGroup/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQAv9iq/R.INSTALL19f6d968dcf95c/psbcGroup/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQAv9iq/R.INSTALL19f6d968dcf95c/psbcGroup/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-psbcGroup/00new/psbcGroup/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘psbcGroup’ as ‘psbcGroup_1.7_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (psbcGroup)