* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘ppmSuite’ ... ** package ‘ppmSuite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnEsB6N/R.INSTALL1706e73ab9372b/ppmSuite/src' gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rutil.c -o Rutil.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ToolsDF.f -o ToolsDF.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ToolsGS.f -o ToolsGS.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ToolsML.f -o ToolsML.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ToolsPD.f -o ToolsPD.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c ToolsPM.f -o ToolsPM.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ToolsR.c -o ToolsR.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bivariate.curvecluster.c -o bivariate.curvecluster.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c curvecluster.c -o curvecluster.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gaussian.ppmx.c -o gaussian.ppmx.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gaussian.ppmx.missing.c -o gaussian.ppmx.missing.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matrix.c -o matrix.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c mcmcbetas.f -o mcmcbetas.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c mcmclogitp.f -o mcmclogitp.o gfortran-13 -fpic -g -O2 -Wall -mtune=native -c mcmclogitp2.f -o mcmclogitp2.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mcmcloop.sppm.c -o mcmcloop.sppm.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ordinal.ppmx.c -o ordinal.ppmx.o In function ‘ordinal_ppmx’, inlined from ‘ORDINAL_PPMX’ at ordinal.ppmx.c:1760:3: ordinal.ppmx.c:991:16: warning: ‘mn’ may be used uninitialized [-Wmaybe-uninitialized] 991 | _zi[j] = rtnorm(mn, sqrt(_sig2h[_Si[j]-1]), co[y[j]], co[y[j]+1]); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ordinal.ppmx.c: In function ‘ORDINAL_PPMX’: ordinal.ppmx.c:207:53: note: ‘mn’ was declared here 207 | double auxreal, sumxtmp, sumx2tmp, npdN,npdY,npd, mn, xcontmp, uu, xb=0; | ^~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ordinal.ppmx.missing.c -o ordinal.ppmx.missing.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c routine.rppmx.c -o routine.rppmx.o gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o ppmSuite.so Rutil.o ToolsDF.o ToolsGS.o ToolsML.o ToolsPD.o ToolsPM.o ToolsR.o bivariate.curvecluster.o curvecluster.o gaussian.ppmx.o gaussian.ppmx.missing.o init.o matrix.o mcmcbetas.o mcmclogitp.o mcmclogitp2.o mcmcloop.sppm.o ordinal.ppmx.o ordinal.ppmx.missing.o routine.rppmx.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnEsB6N/R.INSTALL1706e73ab9372b/ppmSuite/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnEsB6N/R.INSTALL1706e73ab9372b/ppmSuite/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnEsB6N/R.INSTALL1706e73ab9372b/ppmSuite/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-ppmSuite/00new/ppmSuite/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘ppmSuite’ as ‘ppmSuite_0.3.4_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (ppmSuite)