* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘phenex’ ...
** package ‘phenex’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAHQ0nI/R.INSTALL16f603763b9b0c/phenex/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c analyzeBits.c -o analyzeBits.o
analyzeBits.c: In function ‘getBits’:
analyzeBits.c:26:13: warning: unused variable ‘erg’ [-Wunused-variable]
   26 |         int erg;
      |             ^~~
analyzeBits.c: In function ‘getLandWater’:
analyzeBits.c:36:13: warning: unused variable ‘erg’ [-Wunused-variable]
   36 |         int erg;
      |             ^~~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c condition.c -o condition.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c date2doy.c -o date2doy.o
date2doy.c: In function ‘isLeap’:
date2doy.c:56:12: warning: suggest explicit braces to avoid ambiguous ‘else’ [-Wdangling-else]
   56 |         if (year % 4 == 0)
      |            ^
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c phenex.c -o phenex.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c quicksort.c -o quicksort.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c ravg.c -o ravg.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c savgol.c -o savgol.o
savgol.c: In function ‘savGol’:
savgol.c:8:19: warning: unused variable ‘h’ [-Wunused-variable]
    8 |         int days, h=21, i, j, count, step, position, errorflag=0;
      |                   ^
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c sigmoid.c -o sigmoid.o
gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o phenex.so analyzeBits.o condition.o date2doy.o phenex.o quicksort.o ravg.o savgol.o sigmoid.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAHQ0nI/R.INSTALL16f603763b9b0c/phenex/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpAHQ0nI/R.INSTALL16f603763b9b0c/phenex/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpAHQ0nI/R.INSTALL16f603763b9b0c/phenex/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-phenex/00new/phenex/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘phenex’ as ‘phenex_1.4-5_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (phenex)