* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘nlmixr2extra’ ...
** package ‘nlmixr2extra’ successfully unpacked and MD5 sums checked
** using staged installation

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> if (!dir.exists("data")) {
+   dir.create("data")
+ }
> 
> .in <- suppressWarnings(readLines("src/Makevars.in"))
> if (.Platform$OS.type == "windows" && !file.exists("src/Makevars.win")) {
+   file.out <- file("src/Makevars.win", "wb")
+   writeLines(.in, file.out)
+   close(file.out)
+ } else {
+   file.out <- file("src/Makevars", "wb")
+   writeLines(.in, file.out)
+   close(file.out)
+ }
> 
> proc.time()
   user  system elapsed 
  0.206   0.050   0.243 
--------[begin src/Makevars]--------
## -*- mode: makefile; -*-

PKG_CXXFLAGS = $(SHLIB_OPENMP_CXXFLAGS) -DARMA_USE_CXX11
PKG_LIBS = $(SHLIB_OPENMP_CXXFLAGS) $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
--------[end src/Makevars]--------
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpauKNWU/R.INSTALL26f9e61ab38757/nlmixr2extra/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_USE_CXX11 -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c init.c -o init.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppArmadillo/include' -I/usr/local/include -D_FORTIFY_SOURCE=3  -fopenmp -DARMA_USE_CXX11 -fpic  -g -O2 -Wall -pedantic -mtune=native   -c preCondInv.cpp -o preCondInv.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o nlmixr2extra.so RcppExports.o init.o preCondInv.o -fopenmp -llapack -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpauKNWU/R.INSTALL26f9e61ab38757/nlmixr2extra/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpauKNWU/R.INSTALL26f9e61ab38757/nlmixr2extra/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpauKNWU/R.INSTALL26f9e61ab38757/nlmixr2extra/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-nlmixr2extra/00new/nlmixr2extra/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘nlmixr2extra’ as ‘nlmixr2extra_2.0.9_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (nlmixr2extra)