* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘neojags’ ... ** package ‘neojags’ successfully unpacked and MD5 sums checked ** using staged installation checking for pkg-config... /usr/bin/pkg-config configure: Setting compile and link flags according to pkg-config configure: Compile flags are -I/usr/include/JAGS configure: Link flags are -ljags checking for gcc... gcc-13 checking whether we are using the GNU C compiler... no checking whether gcc-13 accepts -g... no checking for gcc-13 option to accept ISO C89... unsupported checking for jags_version in -ljags... yes checking version of JAGS library... configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’ using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1YbnX1/R.INSTALL16bea716617ac7/neojags/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/jags/DFunction.cc -o distributions/jags/DFunction.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/jags/DPQFunction.cc -o distributions/jags/DPQFunction.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/jags/PFunction.cc -o distributions/jags/PFunction.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/jags/QFunction.cc -o distributions/jags/QFunction.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/jags/RScalarDist.cc -o distributions/jags/RScalarDist.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DGmsnburr.cc -o distributions/DGmsnburr.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DMsnburr.cc -o distributions/DMsnburr.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DMsnburr2a.cc -o distributions/DMsnburr2a.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DSkewnf.cc -o distributions/DSkewnf.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DSkewtf.cc -o distributions/DSkewtf.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DLep.cc -o distributions/DLep.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DFossep.cc -o distributions/DFossep.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions/DJsep.cc -o distributions/DJsep.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c neojags.cc -o neojags.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/include/JAGS -D JAGS_MAJOR_FORCED=0 -D JAGS_MAJOR_ASSUMED=0 -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c testneojags.cc -o testneojags.o g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o neojags.so distributions/jags/DFunction.o distributions/jags/DPQFunction.o distributions/jags/PFunction.o distributions/jags/QFunction.o distributions/jags/RScalarDist.o distributions/DGmsnburr.o distributions/DMsnburr.o distributions/DMsnburr2a.o distributions/DSkewnf.o distributions/DSkewtf.o distributions/DLep.o distributions/DFossep.o distributions/DJsep.o init.o neojags.o testneojags.o -ljags -ljrmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1YbnX1/R.INSTALL16bea716617ac7/neojags/src' make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1YbnX1/R.INSTALL16bea716617ac7/neojags/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1YbnX1/R.INSTALL16bea716617ac7/neojags/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-neojags/00new/neojags/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘neojags’ as ‘neojags_0.1.4_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (neojags)