- using R Under development (unstable) (2024-04-29 r86495)
- using platform: x86_64-pc-linux-gnu
- R was compiled by
gcc-13 (Debian 13.2.0-23) 13.2.0
GNU Fortran (Debian 13.2.0-23) 13.2.0
- running under: Debian GNU/Linux trixie/sid
- using session charset: UTF-8
- checking for file ‘neojags/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘neojags’ version ‘0.1.4’
- package encoding: UTF-8
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘neojags’ can be installed ... OK
See the install log for details.
- used C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
- used C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
- checking package directory ... OK
- checking for future file timestamps ... OK
- checking ‘build’ directory ... OK
- checking DESCRIPTION meta-information ... OK
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking code files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... [0s/1s] OK
- checking whether the package can be loaded with stated dependencies ... [0s/1s] OK
- checking whether the package can be unloaded cleanly ... [0s/0s] OK
- checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
- checking whether the namespace can be unloaded cleanly ... [0s/1s] OK
- checking loading without being on the library search path ... [0s/1s] OK
- checking whether startup messages can be suppressed ... [0s/0s] OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [5s/9s] OK
- checking Rd files ... [0s/1s] OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking line endings in shell scripts ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking use of PKG_*FLAGS in Makefiles ... OK
- checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... OK
- checking installed files from ‘inst/doc’ ... OK
- checking files in ‘vignettes’ ... OK
- checking examples ... [1s/1s] OK
- checking for unstated dependencies in ‘tests’ ... OK
- checking tests ... [5s/8s] OK
Running ‘checkmodule.R’ [1s/3s]
Running ‘spelling.R’ [0s/1s]
Comparing ‘spelling.Rout’ to ‘spelling.Rout.save’ ...3,27d2
< > # This file is copied and modified from runjags package
< > # Copyright (C) 2013 Matthew Denwood <matthewdenwood@mac.com> and Achmad Syahrul Choir <madsyair@gmail.com>
< > #
< > # This code allows the distributions provided by the neojags module
< > # to be tested from within R.
< > #
< > # This version of the module is compatible with JAGS version 3 and 4.
< > # Some necessary modifications are controlled using the INCLUDERSCALARDIST
< > # macro which is defined by makevars if JAGS version 3 is detected.
< > # Once JAGS version 3 becomes obsolete the redundant code will be
< > # removed from neojags.
< > #
< > # neojags is free software: you can redistribute it and/or modify
< > # it under the terms of the GNU General Public License as published by
< > # the Free Software Foundation, either version 3 of the License, or
< > # (at your option) any later version.
< > #
< > # neojags is distributed in the hope that it will be useful,
< > # but WITHOUT ANY WARRANTY; without even the implied warranty of
< > # MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
< > # GNU General Public License for more details.
< > #
< > # You should have received a copy of the GNU General Public License
< > # along with runjags If not, see <http://www.gnu.org/licenses/>.
< >
31c6
< NULL
---
> All Done!
Running ‘testthat.R’ [3s/4s]
- checking for unstated dependencies in vignettes ... OK
- checking package vignettes ... OK
- checking re-building of vignette outputs ... [7s/15s] OK
- checking PDF version of manual ... [4s/11s] OK
- checking HTML version of manual ... [1s/1s] OK
- checking for non-standard things in the check directory ... OK
- DONE
Status: OK