- using R Under development (unstable) (2018-04-20 r74620)
- using platform: x86_64-pc-linux-gnu (64-bit)
- using session charset: UTF-8
- checking for file ‘mixcat/DESCRIPTION’ ... OK
- checking extension type ... Package
- this is package ‘mixcat’ version ‘1.0-3’
- checking package namespace information ... OK
- checking package dependencies ... OK
- checking if this is a source package ... OK
- checking if there is a namespace ... OK
- checking for executable files ... OK
- checking for hidden files and directories ... OK
- checking for portable file names ... OK
- checking for sufficient/correct file permissions ... OK
- checking serialization versions ... OK
- checking whether package ‘mixcat’ can be installed ... OK
- checking package directory ... OK
- checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
- checking top-level files ... OK
- checking for left-over files ... OK
- checking index information ... OK
- checking package subdirectories ... OK
- checking R files for non-ASCII characters ... OK
- checking R files for syntax errors ... OK
- checking whether the package can be loaded ... OK
- checking whether the package can be loaded with stated dependencies ... OK
- checking whether the package can be unloaded cleanly ... OK
- checking whether the namespace can be loaded with stated dependencies ... OK
- checking whether the namespace can be unloaded cleanly ... OK
- checking loading without being on the library search path ... OK
- checking use of S3 registration ... OK
- checking dependencies in R code ... OK
- checking S3 generic/method consistency ... OK
- checking replacement functions ... OK
- checking foreign function calls ... OK
- checking R code for possible problems ... [4s/7s] NOTE
npmlt: no visible global function definition for ‘model.frame’
npmlt: no visible binding for global variable ‘na.pass’
npmlt: no visible global function definition for ‘model.matrix’
npmlt: no visible global function definition for ‘na.omit’
npmlt: no visible global function definition for ‘glm’
npmlt: no visible binding for global variable ‘binomial’
npmlt: no visible global function definition for ‘cov2cor’
Undefined global functions or variables:
binomial cov2cor glm model.frame model.matrix na.omit na.pass
Consider adding
importFrom("stats", "binomial", "cov2cor", "glm", "model.frame",
"model.matrix", "na.omit", "na.pass")
to your NAMESPACE file.
- checking Rd files ... OK
- checking Rd metadata ... OK
- checking Rd line widths ... OK
- checking Rd cross-references ... OK
- checking for missing documentation entries ... OK
- checking for code/documentation mismatches ... OK
- checking Rd \usage sections ... OK
- checking Rd contents ... OK
- checking for unstated dependencies in examples ... OK
- checking contents of ‘data’ directory ... OK
- checking data for non-ASCII characters ... OK
- checking data for ASCII and uncompressed saves ... OK
- checking line endings in C/C++/Fortran sources/headers ... OK
- checking line endings in Makefiles ... OK
- checking compilation flags in Makevars ... OK
- checking for GNU extensions in Makefiles ... OK
- checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
- checking pragmas in C/C++ headers and code ... OK
- checking compilation flags used ... OK
- checking compiled code ... NOTE
File ‘mixcat/libs/mixcat.so’:
Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
It is good practice to register native routines and to disable symbol
search.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
- checking examples ... [9s/13s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
npmlt 4.508 0.020 6.161
summary.npmreg 4.185 0.015 5.961
- checking PDF version of manual ... OK
- DONE
Status: 3 NOTEs