* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘knnmi’ ...
** package ‘knnmi’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8cxzaE/R.INSTALLf552760f235c8/knnmi/src'
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude/ -Iinclude/eigen3/ -DNDEBUG -DEIGEN_NO_DEBUG -DEIGEN_NO_IO -fpic -g -O2 -Wall -pedantic -mtune=native -c CondMutualInformation.cpp -o CondMutualInformation.o
In file included from include/eigen3/Eigen/Core:205,
from include/CondMutualInformation.h:23,
from CondMutualInformation.cpp:22:
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
49 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
222 | template<> struct unpacket_traits<Packet4f> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
228 | template<> struct unpacket_traits<Packet2d> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
In file included from include/eigen3/Eigen/Core:174:
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from include/CondMutualInformation.h:26:
include/MutualInformationBase.h:81:24: warning: ‘virtual double CaDrA::MutualInformationBase::sum_digamma_from_neighbors(CaDrA::MapArrayConst&, const std::vector<double>&)’ was hidden [-Woverloaded-virtual=]
81 | virtual double sum_digamma_from_neighbors(MapArrayConst &vec, const vector<double> &dists) ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
include/CondMutualInformation.h:54:24: note: by ‘virtual double CaDrA::CondMutualInformation::sum_digamma_from_neighbors(CaDrA::MapArrayConst&, CaDrA::MapArrayConst&, const std::vector<double>&)’
54 | virtual double sum_digamma_from_neighbors(MapArrayConst &vec1, MapArrayConst &vec2, const vector<double> &dists) ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
include/MutualInformationBase.h:65:24: warning: ‘virtual double CaDrA::MutualInformationBase::compute()’ was hidden [-Woverloaded-virtual=]
65 | virtual double compute() ;
| ^~~~~~~
include/CondMutualInformation.h:49:24: note: by ‘virtual double CaDrA::CondMutualInformation::compute(const Eigen::ArrayXd&, const Eigen::ArrayXd&, const Eigen::ArrayXd&)’
49 | virtual double compute(const ArrayXd &x, const ArrayXd& y, const ArrayXd& z) ;
| ^~~~~~~
In file included from include/eigen3/Eigen/Core:165:
include/eigen3/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
include/eigen3/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
CondMutualInformation.cpp:55:13: required from here
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from include/eigen3/Eigen/Core:271:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
CondMutualInformation.cpp:55:13: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
56 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 3>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 3>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 3>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 3> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 3> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 3> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 3>’
CondMutualInformation.cpp:60:21: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true> >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>, 0>’
include/eigen3/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>, 1>’
include/eigen3/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Array<double, -1, 3>, -1, 1, true, true>’
include/eigen3/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Array<double, -1, 3>, -1, 1, true, Eigen::Dense>’
include/eigen3/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>’
CondMutualInformation.cpp:65:14: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 2>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’
include/eigen3/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Array<double, -1, 1> >’
CondMutualInformation.cpp:75:25: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 2>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 2>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 2>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 2> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 2> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 2> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 2>’
CondMutualInformation.cpp:99:21: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true> >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 0>’
include/eigen3/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 1>’
include/eigen3/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Array<double, -1, 2>, -1, 1, true, true>’
include/eigen3/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Array<double, -1, 2>, -1, 1, true, Eigen::Dense>’
include/eigen3/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>’
CondMutualInformation.cpp:100:14: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
In file included from include/eigen3/Eigen/Core:277:
include/eigen3/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true> >’:
include/eigen3/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>; SrcXprType = Eigen::Array<double, -1, 1>; Functor = assign_op<double, double>]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>; SrcXprType = Eigen::Array<double, -1, 1>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>; Src = Eigen::Array<double, -1, 1>; Func = assign_op<double, double>]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>; Src = Eigen::Array<double, -1, 1>; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>; Src = Eigen::Array<double, -1, 1>]’
include/eigen3/Eigen/src/Core/Assign.h:41:28: required from ‘Derived& Eigen::DenseBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Array<double, -1, 1>; Derived = Eigen::Block<Eigen::Array<double, -1, 3>, -1, 1, true>]’
CondMutualInformation.cpp:65:45: required from here
include/eigen3/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment,
| ^~~~~~~~~
include/eigen3/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true> >’:
include/eigen3/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; SrcXprType = Eigen::Map<const Eigen::Array<double, -1, 1> >; Functor = assign_op<double, double>]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; SrcXprType = Eigen::Map<const Eigen::Array<double, -1, 1> >; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; Src = Eigen::Map<const Eigen::Array<double, -1, 1> >; Func = assign_op<double, double>]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; Src = Eigen::Map<const Eigen::Array<double, -1, 1> >; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; Src = Eigen::Map<const Eigen::Array<double, -1, 1> >]’
include/eigen3/Eigen/src/Core/Assign.h:41:28: required from ‘Derived& Eigen::DenseBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Map<const Eigen::Array<double, -1, 1> >; Derived = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>]’
CondMutualInformation.cpp:100:20: required from here
include/eigen3/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude/ -Iinclude/eigen3/ -DNDEBUG -DEIGEN_NO_DEBUG -DEIGEN_NO_IO -fpic -g -O2 -Wall -pedantic -mtune=native -c MI_Matrix.cpp -o MI_Matrix.o
In file included from include/eigen3/Eigen/Core:205,
from include/MutualInformation.h:24,
from MI_Matrix.cpp:35:
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
49 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
222 | template<> struct unpacket_traits<Packet4f> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
228 | template<> struct unpacket_traits<Packet2d> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
In file included from include/eigen3/Eigen/Core:174:
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from include/MutualInformation.h:27:
include/MutualInformationBase.h:65:24: warning: ‘virtual double CaDrA::MutualInformationBase::compute()’ was hidden [-Woverloaded-virtual=]
65 | virtual double compute() ;
| ^~~~~~~
include/MutualInformation.h:50:18: note: by ‘virtual double CaDrA::MutualInformation::compute(const Eigen::ArrayXd&, const Eigen::ArrayXd&)’
50 | virtual double compute(const ArrayXd &x, const ArrayXd& y) ;
| ^~~~~~~
include/MutualInformationBase.h:65:24: warning: ‘virtual double CaDrA::MutualInformationBase::compute()’ was hidden [-Woverloaded-virtual=]
65 | virtual double compute() ;
| ^~~~~~~
In file included from MI_Matrix.cpp:36:
include/MutualInformationDiscrete.h:50:18: note: by ‘virtual double CaDrA::MutualInformationDiscrete::compute(const Eigen::ArrayXd&, const Eigen::ArrayXi&)’
50 | virtual double compute(const ArrayXd &x, const ArrayXi& y) ;
| ^~~~~~~
include/MutualInformationBase.h:81:24: warning: ‘virtual double CaDrA::MutualInformationBase::sum_digamma_from_neighbors(CaDrA::MapArrayConst&, const std::vector<double>&)’ was hidden [-Woverloaded-virtual=]
81 | virtual double sum_digamma_from_neighbors(MapArrayConst &vec, const vector<double> &dists) ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from MI_Matrix.cpp:37:
include/CondMutualInformation.h:54:24: note: by ‘virtual double CaDrA::CondMutualInformation::sum_digamma_from_neighbors(CaDrA::MapArrayConst&, CaDrA::MapArrayConst&, const std::vector<double>&)’
54 | virtual double sum_digamma_from_neighbors(MapArrayConst &vec1, MapArrayConst &vec2, const vector<double> &dists) ;
| ^~~~~~~~~~~~~~~~~~~~~~~~~~
include/MutualInformationBase.h:65:24: warning: ‘virtual double CaDrA::MutualInformationBase::compute()’ was hidden [-Woverloaded-virtual=]
65 | virtual double compute() ;
| ^~~~~~~
include/CondMutualInformation.h:49:24: note: by ‘virtual double CaDrA::CondMutualInformation::compute(const Eigen::ArrayXd&, const Eigen::ArrayXd&, const Eigen::ArrayXd&)’
49 | virtual double compute(const ArrayXd &x, const ArrayXd& y, const ArrayXd& z) ;
| ^~~~~~~
In file included from include/eigen3/Eigen/Core:165:
include/eigen3/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
include/eigen3/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/util/ForwardDeclarations.h:23:29: required from ‘struct Eigen::internal::traits<const Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Map.h:18:8: required from ‘struct Eigen::internal::traits<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map<const Eigen::Array<double, -1, 1> >’
MI_Matrix.cpp:54:32: required from here
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from include/eigen3/Eigen/Core:271:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
include/eigen3/Eigen/src/Core/Map.h:24:49: required from ‘struct Eigen::internal::traits<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/util/ForwardDeclarations.h:32:48: required from ‘struct Eigen::internal::accessors_level<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/util/ForwardDeclarations.h:111:75: required from ‘class Eigen::Map<const Eigen::Array<double, -1, 1> >’
MI_Matrix.cpp:54:32: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
56 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 2>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’
include/eigen3/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Array<double, -1, 1> >’
MI_Matrix.cpp:54:32: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude/ -Iinclude/eigen3/ -DNDEBUG -DEIGEN_NO_DEBUG -DEIGEN_NO_IO -fpic -g -O2 -Wall -pedantic -mtune=native -c MutualInformation.cpp -o MutualInformation.o
In file included from include/eigen3/Eigen/Core:205,
from include/MutualInformation.h:24,
from MutualInformation.cpp:21:
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
49 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
222 | template<> struct unpacket_traits<Packet4f> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
228 | template<> struct unpacket_traits<Packet2d> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
In file included from include/eigen3/Eigen/Core:174:
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from include/MutualInformation.h:27:
include/MutualInformationBase.h:65:24: warning: ‘virtual double CaDrA::MutualInformationBase::compute()’ was hidden [-Woverloaded-virtual=]
65 | virtual double compute() ;
| ^~~~~~~
include/MutualInformation.h:50:18: note: by ‘virtual double CaDrA::MutualInformation::compute(const Eigen::ArrayXd&, const Eigen::ArrayXd&)’
50 | virtual double compute(const ArrayXd &x, const ArrayXd& y) ;
| ^~~~~~~
In file included from include/eigen3/Eigen/Core:165:
include/eigen3/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
include/eigen3/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
MutualInformation.cpp:57:13: required from here
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from include/eigen3/Eigen/Core:271:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
MutualInformation.cpp:57:13: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
56 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 2>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 2>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 2>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 2> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 2> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 2> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 2>’
MutualInformation.cpp:59:22: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true> >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 0>’
include/eigen3/Eigen/src/Core/MapBase.h:223:34: required from ‘class Eigen::MapBase<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>, 1>’
include/eigen3/Eigen/src/Core/Block.h:329:7: required from ‘class Eigen::internal::BlockImpl_dense<Eigen::Array<double, -1, 2>, -1, 1, true, true>’
include/eigen3/Eigen/src/Core/Block.h:154:7: required from ‘class Eigen::BlockImpl<Eigen::Array<double, -1, 2>, -1, 1, true, Eigen::Dense>’
include/eigen3/Eigen/src/Core/Block.h:103:81: required from ‘class Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>’
MutualInformation.cpp:63:14: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 2>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’
include/eigen3/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Array<double, -1, 1> >’
MutualInformation.cpp:67:25: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
In file included from include/eigen3/Eigen/Core:277:
include/eigen3/Eigen/src/Core/CoreEvaluators.h: In instantiation of ‘struct Eigen::internal::evaluator<Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true> >’:
include/eigen3/Eigen/src/Core/AssignEvaluator.h:780:20: required from ‘void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; SrcXprType = Eigen::Array<double, -1, 1>; Functor = assign_op<double, double>]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31: required from ‘static void Eigen::internal::Assignment<DstXprType, SrcXprType, Functor, Eigen::internal::Dense2Dense, Weak>::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; SrcXprType = Eigen::Array<double, -1, 1>; Functor = Eigen::internal::assign_op<double, double>; Weak = void]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49: required from ‘void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; Src = Eigen::Array<double, -1, 1>; Func = assign_op<double, double>]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type) [with Dst = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; Src = Eigen::Array<double, -1, 1>; Func = assign_op<double, double>; typename enable_if<(! evaluator_assume_aliasing<Src>::value), void*>::type = void*; typename evaluator_traits<SrcXprType>::Shape = Eigen::DenseShape]’
include/eigen3/Eigen/src/Core/AssignEvaluator.h:836:18: required from ‘void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>; Src = Eigen::Array<double, -1, 1>]’
include/eigen3/Eigen/src/Core/Assign.h:41:28: required from ‘Derived& Eigen::DenseBase<Derived>::operator=(const Eigen::DenseBase<OtherDerived>&) [with OtherDerived = Eigen::Array<double, -1, 1>; Derived = Eigen::Block<Eigen::Array<double, -1, 2>, -1, 1, true>]’
MutualInformation.cpp:63:45: required from here
include/eigen3/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
1071 | PacketAlignment = unpacket_traits<PacketScalar>::alignment,
| ^~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude/ -Iinclude/eigen3/ -DNDEBUG -DEIGEN_NO_DEBUG -DEIGEN_NO_IO -fpic -g -O2 -Wall -pedantic -mtune=native -c MutualInformationBase.cpp -o MutualInformationBase.o
In file included from include/eigen3/Eigen/Core:205,
from include/MutualInformationBase.h:24,
from MutualInformationBase.cpp:22:
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
49 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
222 | template<> struct unpacket_traits<Packet4f> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
228 | template<> struct unpacket_traits<Packet2d> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
In file included from include/eigen3/Eigen/Core:174:
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from include/eigen3/Eigen/Core:165:
include/eigen3/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
include/eigen3/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
MutualInformationBase.cpp:58:102: required from here
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from include/eigen3/Eigen/Core:271:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
MutualInformationBase.cpp:58:102: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
56 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, 0>’:
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from ‘class Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from ‘struct Eigen::internal::traits<Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
MutualInformationBase.cpp:65:43: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_pow_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
MutualInformationBase.cpp:65:43: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >, 0>’:
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > > >’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from ‘class Eigen::CwiseBinaryOpImpl<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> >, Eigen::Dense>’
include/eigen3/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from ‘class Eigen::CwiseBinaryOp<Eigen::internal::scalar_quotient_op<double, double>, const Eigen::Array<double, -1, 1>, const Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, const Eigen::Array<double, -1, 1> > >’
MutualInformationBase.cpp:66:26: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 2>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Map<const Eigen::Array<double, -1, 1> > >’
include/eigen3/Eigen/src/Core/MapBase.h:37:34: required from ‘class Eigen::MapBase<Eigen::Map<const Eigen::Array<double, -1, 1> >, 0>’
include/eigen3/Eigen/src/Core/Map.h:94:79: required from ‘class Eigen::Map<const Eigen::Array<double, -1, 1> >’
include/nanoflann.hpp:2312:11: required from ‘struct nanoflann::KDTreeEigenMatrixAdaptor<Eigen::Map<const Eigen::Array<double, -1, 1> >, -1, nanoflann::metric_L1>’
MutualInformationBase.cpp:113:86: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase<Derived>&) [with Derived = Eigen::Array<double, -1, 1>; Eigen::Index = long int]’:
include/eigen3/Eigen/src/Core/Redux.h:243:63: required from ‘static Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::Scalar Eigen::internal::redux_impl<Func, Evaluator, 3, 0>::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::Array<double, -1, 1>; Func = Eigen::internal::scalar_sum_op<double, double>; Evaluator = Eigen::internal::redux_evaluator<Eigen::Array<double, -1, 1> >; Scalar = double]’
include/eigen3/Eigen/src/Core/Redux.h:418:56: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op<double, double>; Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
include/eigen3/Eigen/src/Core/Redux.h:478:32: required from ‘typename Eigen::internal::traits<T>::Scalar Eigen::DenseBase<Derived>::mean() const [with Derived = Eigen::Array<double, -1, 1>; typename Eigen::internal::traits<T>::Scalar = double]’
MutualInformationBase.cpp:77:26: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
654 | return internal::first_aligned<int(unpacket_traits<DefaultPacketType>::alignment),Derived>(m);
| ^~~~~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -Iinclude/ -Iinclude/eigen3/ -DNDEBUG -DEIGEN_NO_DEBUG -DEIGEN_NO_IO -fpic -g -O2 -Wall -pedantic -mtune=native -c MutualInformationDiscrete.cpp -o MutualInformationDiscrete.o
In file included from include/eigen3/Eigen/Core:205,
from include/MutualInformationDiscrete.h:24,
from MutualInformationDiscrete.cpp:21:
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b;
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument ‘__m128’ [-Wignored-attributes]
49 | template<> struct is_arithmetic<__m128> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument ‘__m128i’ [-Wignored-attributes]
50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument ‘__m128d’ [-Wignored-attributes]
51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; };
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
222 | template<> struct unpacket_traits<Packet4f> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
228 | template<> struct unpacket_traits<Packet2d> {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
1124 | ptranspose(PacketBlock<Packet4f,4>& kernel) {
| ^
include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
1129 | ptranspose(PacketBlock<Packet2d,2>& kernel) {
| ^
In file included from include/eigen3/Eigen/Core:174:
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet4f’ {aka ‘__m128’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
16 | struct conj_helper<PACKET_REAL, PACKET_CPLX, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument ‘Eigen::internal::Packet2d’ {aka ‘__m128d’} [-Wignored-attributes]
29 | struct conj_helper<PACKET_CPLX, PACKET_REAL, false, false> { \
| ^
include/eigen3/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro ‘EIGEN_MAKE_CONJ_HELPER_CPLX_REAL’
298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d)
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from include/MutualInformationDiscrete.h:27:
include/MutualInformationBase.h:65:24: warning: ‘virtual double CaDrA::MutualInformationBase::compute()’ was hidden [-Woverloaded-virtual=]
65 | virtual double compute() ;
| ^~~~~~~
include/MutualInformationDiscrete.h:50:18: note: by ‘virtual double CaDrA::MutualInformationDiscrete::compute(const Eigen::ArrayXd&, const Eigen::ArrayXi&)’
50 | virtual double compute(const ArrayXd &x, const ArrayXi& y) ;
| ^~~~~~~
In file included from include/eigen3/Eigen/Core:165:
include/eigen3/Eigen/src/Core/util/XprHelper.h: In instantiation of ‘struct Eigen::internal::find_best_packet<double, -1>’:
include/eigen3/Eigen/src/Core/Matrix.h:22:57: required from ‘struct Eigen::internal::traits<Eigen::Matrix<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:17:8: required from ‘struct Eigen::internal::traits<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
MutualInformationDiscrete.cpp:49:13: required from here
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
190 | bool Stop = Size==Dynamic || (Size%unpacket_traits<PacketType>::size)==0 || is_same<PacketType,typename unpacket_traits<PacketType>::half>::value>
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument ‘Eigen::internal::unpacket_traits<__vector(2) double>::half’ {aka ‘__m128d’} [-Wignored-attributes]
include/eigen3/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
208 | typedef typename find_best_packet_helper<Size,typename packet_traits<T>::type>::type type;
| ^~~~
In file included from include/eigen3/Eigen/Core:271:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 1>’
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::Array<double, -1, 1>, 3>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7: required from ‘class Eigen::PlainObjectBase<Eigen::Array<double, -1, 1> >’
include/eigen3/Eigen/src/Core/Array.h:45:7: required from ‘class Eigen::Array<double, -1, 1>’
MutualInformationDiscrete.cpp:49:13: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
56 | >::type PacketReturnType;
| ^~~~~~~~~~~~~~~~
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of ‘class Eigen::DenseCoeffsBase<Eigen::IndexedView<Eigen::Array<double, -1, 1>, std::vector<int>, Eigen::internal::SingleRange>, 0>’:
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from ‘class Eigen::DenseCoeffsBase<Eigen::IndexedView<Eigen::Array<double, -1, 1>, std::vector<int>, Eigen::internal::SingleRange>, 1>’
include/eigen3/Eigen/src/Core/DenseBase.h:41:34: required from ‘class Eigen::DenseBase<Eigen::IndexedView<Eigen::Array<double, -1, 1>, std::vector<int>, Eigen::internal::SingleRange> >’
include/eigen3/Eigen/src/Core/ArrayBase.h:39:34: required from ‘class Eigen::ArrayBase<Eigen::IndexedView<Eigen::Array<double, -1, 1>, std::vector<int>, Eigen::internal::SingleRange> >’
include/eigen3/Eigen/src/Core/IndexedView.h:153:7: required from ‘class Eigen::IndexedViewImpl<Eigen::Array<double, -1, 1>, std::vector<int>, Eigen::internal::SingleRange, Eigen::Dense>’
include/eigen3/Eigen/src/Core/IndexedView.h:109:7: required from ‘class Eigen::IndexedView<Eigen::Array<double, -1, 1>, std::vector<int>, Eigen::internal::SingleRange>’
MutualInformationDiscrete.cpp:97:33: required from here
include/eigen3/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument ‘Eigen::internal::packet_traits<double>::type’ {aka ‘__m128d’} [-Wignored-attributes]
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c knn_mi_lib.c -o knn_mi_lib.o
knn_mi_lib.c: In function ‘_cond_mutual_inf’:
knn_mi_lib.c:290:9: warning: ‘mi’ may be used uninitialized [-Wmaybe-uninitialized]
290 | return( mi );
| ^
knn_mi_lib.c:192:8: note: ‘mi’ was declared here
192 | SEXP mi ;
| ^~
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o knnmi.so CondMutualInformation.o MI_Matrix.o MutualInformation.o MutualInformationBase.o MutualInformationDiscrete.o knn_mi_lib.o registerDynamicSymbol.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8cxzaE/R.INSTALLf552760f235c8/knnmi/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8cxzaE/R.INSTALLf552760f235c8/knnmi/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8cxzaE/R.INSTALLf552760f235c8/knnmi/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-knnmi/00new/knnmi/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘knnmi’ as ‘knnmi_1.0_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (knnmi)