* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘kmer’ ...
** package ‘kmer’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
using C++11
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUiQfcW/R.INSTALL1ac76d2c5f7aee/kmer/src'
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c RcppExports.cpp -o RcppExports.o
g++-13 -std=gnu++11 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG  -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c distance.cpp -o distance.o
distance.cpp: In function ‘Rcpp::NumericMatrix kcountDNA(Rcpp::List, int)’:
distance.cpp:10:6: warning: unnecessary parentheses in declaration of ‘fourtopowerk’ [-Wparentheses]
   10 |   int(fourtopowerk) = 1;
      |      ^~~~~~~~~~~~~~
distance.cpp:10:6: note: remove parentheses
   10 |   int(fourtopowerk) = 1;
      |      ^~~~~~~~~~~~~~
      |      -            -
g++-13 -std=gnu++11 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o kmer.so RcppExports.o distance.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUiQfcW/R.INSTALL1ac76d2c5f7aee/kmer/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUiQfcW/R.INSTALL1ac76d2c5f7aee/kmer/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUiQfcW/R.INSTALL1ac76d2c5f7aee/kmer/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-kmer/00new/kmer/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘kmer’ as ‘kmer_1.1.2_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (kmer)