* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘jomo’ ... ** package ‘jomo’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHcKoBf/R.INSTALL2a42717fff65cb/jomo/src' gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1C.c -o jomo1C.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ranC.c -o jomo1ranC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ranhrC.c -o jomo1ranhrC.o jomo1ranhrC.c: In function ‘jomo1ranhrC’: jomo1ranhrC.c:629:85: warning: ‘aj’ may be used uninitialized [-Wmaybe-uninitialized] 629 | newlogLH=newlogLH*(-0.5)-(aj+JY+1)*log(detom)/2; | ~~^~~ jomo1ranhrC.c:19:132: note: ‘aj’ was declared here 19 | double *cumclus, *allinvomega,gamma,eta,dx,u_new,precision, *invgamma, *invA, *Gammapr, *Gammastar,u_m,con2,deriv2,u_prop, lambda, aj, *listh8, *listomega; | ^~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ranhrsmcC.c -o jomo1ranhrsmcC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1ransmcC.c -o jomo1ransmcC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo1smcC.c -o jomo1smcC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2comC.c -o jomo2comC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2hrC.c -o jomo2hrC.o jomo2hrC.c: In function ‘jomo2hrC’: jomo2hrC.c:932:85: warning: ‘aj’ may be used uninitialized [-Wmaybe-uninitialized] 932 | newlogLH=newlogLH*(-0.5)-(aj+JY+1)*log(detom)/2; | ~~^~~ jomo2hrC.c:19:132: note: ‘aj’ was declared here 19 | double *cumclus, *allinvomega,gamma,eta,dx,u_new,precision, *invgamma, *invA, *Gammapr, *Gammastar,u_m,con2,deriv2,u_prop, lambda, aj,*missing2, *Y2red, *X2red, *fixomega2; | ^~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2hrsmcC.c -o jomo2hrsmcC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo2smcC.c -o jomo2smcC.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c jomo_init.c -o jomo_init.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pdflib.c -o pdflib.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wishart.c -o wishart.o gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o jomo.so jomo1C.o jomo1ranC.o jomo1ranhrC.o jomo1ranhrsmcC.o jomo1ransmcC.o jomo1smcC.o jomo2comC.o jomo2hrC.o jomo2hrsmcC.o jomo2smcC.o jomo_init.o pdflib.o wishart.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHcKoBf/R.INSTALL2a42717fff65cb/jomo/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHcKoBf/R.INSTALL2a42717fff65cb/jomo/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHcKoBf/R.INSTALL2a42717fff65cb/jomo/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-jomo/00new/jomo/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘jomo’ as ‘jomo_2.7-6_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (jomo)