* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘float’ ... ** package ‘float’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-13 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-13 accepts -g... yes checking for gcc-13 option to enable C11 features... none needed checking for sinf in -lm... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking whether byte ordering is bigendian... no checking size of int... 4 checking how to run the C preprocessor... gcc-13 -E checking for gcc-13 option to support OpenMP... -fopenmp checking for echo... yes checking for grep... yes checking for sgemm_ in -lRblas... no checking for sgetrf_ in -lRblas... no checking for sgemm_ in -lopenblas... no checking for sgemm_ in -lmkl... no checking for sgemm_ in -latlas... no checking for sgemm_ in -lblas... yes checking for sgetrf_ in -lopenblas... no checking for sgetrf_ in -lmkl... no checking for sgetrf_ in -latlas... no checking for sgetrf_ in -llapack... yes ******************* Results of float package configure ******************* * OpenMP Report: >> OPENMP_CFLAGS=-fopenmp >> OMPFLAGS_C=$(SHLIB_OPENMP_CFLAGS) >> OMPFLAGS_F=$(SHLIB_OPENMP_FFLAGS) * byte order: little endian * using system BLAS library >> BLAS_LIBFLAGS=-lblas * using system LAPACK library >> LAPACK_LIBFLAGS=-llapack ************************************************************************* configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/endianness.h config.status: creating R/02-libflags.r config.status: creating src/config.h ** libs using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-23) 13.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpodyTwG/R.INSTALLbeddd4ac0160c/float/src' gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c backsolve.c -o backsolve.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c binary.c -o binary.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chol.c -o chol.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c chol2inv.c -o chol2inv.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c colSums.c -o colSums.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cond.c -o cond.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c converters.c -o converters.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c crossprod.c -o crossprod.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c eigen.c -o eigen.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c extremes.c -o extremes.o extremes.c: In function ‘R_whichmin_spm’: extremes.c:140:20: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 140 | REAL(ret)[0] = which; | ~~~~~~~~~~~~~^~~~~~~ extremes.c:110:10: note: ‘which’ was declared here 110 | size_t which; | ^~~~~ extremes.c: In function ‘R_whichmax_spm’: extremes.c:186:20: warning: ‘which’ may be used uninitialized [-Wmaybe-uninitialized] 186 | REAL(ret)[0] = which; | ~~~~~~~~~~~~~^~~~~~~ extremes.c:156:10: note: ‘which’ was declared here 156 | size_t which; | ^~~~~ gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c float_native.c -o float_native.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c isSymmetric.c -o isSymmetric.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c machine.c -o machine.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c math.c -o math.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matmult.c -o matmult.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c NA.c -o NA.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c norm.c -o norm.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c qr.c -o qr.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rand.c -o rand.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c scale.c -o scale.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sign.c -o sign.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c solve.c -o solve.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sum.c -o sum.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c svd.c -o svd.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sweep.c -o sweep.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c xpose.c -o xpose.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils/matmult.c -o utils/matmult.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils/symmetrize.c -o utils/symmetrize.o gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I/usr/local/include -D_FORTIFY_SOURCE=3 -fopenmp -I../inst/include/ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils/xpose.c -o utils/xpose.o gfortran-13 -fopenmp -g -O2 -mtune=native -msse2 -mfpmath=sse -fpic -g -O2 -Wall -mtune=native -c slapack_wrap.f -o slapack_wrap.o gcc-13 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o float.so backsolve.o binary.o chol.o chol2inv.o colSums.o cond.o converters.o crossprod.o eigen.o extremes.o float_native.o isSymmetric.o machine.o math.o matmult.o NA.o norm.o qr.o rand.o scale.o sign.o solve.o sum.o svd.o sweep.o xpose.o utils/matmult.o utils/symmetrize.o utils/xpose.o slapack_wrap.o -llapack -lblas -lgfortran -lm -lquadmath -fopenmp -lgfortran -lm -lquadmath -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR ar crs libfloat.a backsolve.o binary.o chol.o chol2inv.o colSums.o cond.o converters.o crossprod.o eigen.o extremes.o float_native.o isSymmetric.o machine.o math.o matmult.o NA.o norm.o qr.o rand.o scale.o sign.o solve.o sum.o svd.o sweep.o xpose.o utils/matmult.o utils/symmetrize.o utils/xpose.o slapack_wrap.o ranlib libfloat.a make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpodyTwG/R.INSTALLbeddd4ac0160c/float/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpodyTwG/R.INSTALLbeddd4ac0160c/float/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpodyTwG/R.INSTALLbeddd4ac0160c/float/src' installing via 'install.libs.R' to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-float/00new/float ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘backsolve’ from package ‘base’ in package ‘float’ Creating a generic function for ‘forwardsolve’ from package ‘base’ in package ‘float’ Creating a generic function for ‘chol2inv’ from ‘base’ in package ‘float’ (from the saved implicit definition) Creating a generic function for ‘chol2inv’ from package ‘base’ in package ‘float’ Creating a generic function for ‘colSums’ from package ‘base’ in package ‘float’ Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘float’ Creating a generic function for ‘colMeans’ from package ‘base’ in package ‘float’ Creating a generic function for ‘rowMeans’ from package ‘base’ in package ‘float’ Creating a generic function for ‘rcond’ from ‘base’ in package ‘float’ (from the saved implicit definition) Creating a generic function for ‘rcond’ from package ‘base’ in package ‘float’ Creating a generic function for ‘typeof’ from package ‘base’ in package ‘float’ Creating a generic function for ‘storage.mode’ from package ‘base’ in package ‘float’ Creating a generic function for ‘diag’ from package ‘base’ in package ‘float’ Creating a generic function for ‘nrow’ from package ‘base’ in package ‘float’ Creating a generic function for ‘ncol’ from package ‘base’ in package ‘float’ Creating a generic function for ‘NROW’ from package ‘base’ in package ‘float’ Creating a generic function for ‘NCOL’ from package ‘base’ in package ‘float’ Creating a generic function for ‘eigen’ from package ‘base’ in package ‘float’ Creating a generic function for ‘which.min’ from package ‘base’ in package ‘float’ Creating a generic function for ‘which.max’ from package ‘base’ in package ‘float’ Creating a generic function for ‘rownames’ from package ‘base’ in package ‘float’ Creating a generic function for ‘rownames<-’ from package ‘base’ in package ‘float’ Creating a generic function for ‘colnames’ from package ‘base’ in package ‘float’ Creating a generic function for ‘colnames<-’ from package ‘base’ in package ‘float’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘float’ Creating a generic function for ‘qr.Q’ from package ‘base’ in package ‘float’ Creating a generic function for ‘qr.R’ from package ‘base’ in package ‘float’ Creating a generic function for ‘qr.qy’ from package ‘base’ in package ‘float’ Creating a generic function for ‘qr.qty’ from package ‘base’ in package ‘float’ Creating a generic function for ‘La.svd’ from package ‘base’ in package ‘float’ Creating a generic function for ‘svd’ from ‘base’ in package ‘float’ (from the saved implicit definition) Creating a generic function for ‘svd’ from package ‘base’ in package ‘float’ Creating a generic function for ‘sweep’ from package ‘base’ in package ‘float’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘float’ as ‘float_0.3-2_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (float)