• using R Under development (unstable) (2018-04-21 r74624)
• using platform: x86_64-pc-linux-gnu (64-bit)
• using session charset: UTF-8
• checking for file ‘fbati/DESCRIPTION’ ... OK
• this is package ‘fbati’ version ‘1.0-1.1’
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking serialization versions ... OK
• checking whether package ‘fbati’ can be installed ... WARNING
  Found the following significant warnings:
    fbatdist.cpp:431:11: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
    nuclify.cpp:110:30: warning: suggest parentheses around comparison in operand of ‘&’ [-Wparentheses]
  See https://www.r-project.org/nosvn/R.check/r-devel-linux-x86_64-debian-gcc/fbati-00install.html for details.
• checking package directory ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking R files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... OK
• checking whether the package can be loaded with stated dependencies ... OK
• checking whether the package can be unloaded cleanly ... OK
• checking whether the namespace can be loaded with stated dependencies ... OK
• checking whether the namespace can be unloaded cleanly ... OK
• checking loading without being on the library search path ... OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [18s/29s] NOTE
  condGene: no visible global function definition for ‘getFromNamespace’
  condGene: no visible global function definition for ‘pchisq’
  condGeneFBATControl_estEq: no visible global function definition for
    ‘getFromNamespace’
  condGeneFBATControl_estEq: no visible global function definition for
    ‘pchisq’
  condGeneFBATControl_estEqNuis: no visible global function definition
    for ‘getFromNamespace’
  condGeneP: no visible global function definition for ‘getFromNamespace’
  condGeneP: no visible global function definition for ‘pchisq’
  condGeneP2: no visible global function definition for
    ‘getFromNamespace’
  condGeneP2: no visible global function definition for ‘pchisq’
  condGeneP4: no visible global function definition for
    ‘getFromNamespace’
  condGeneP4: no visible global function definition for ‘pchisq’
  condGeneR: no visible global function definition for ‘getFromNamespace’
  condGeneR: no visible global function definition for ‘pchisq’
  cpp_gesim_set: no visible global function definition for ‘qnorm’
  cpp_gped_statCompute: no visible global function definition for
    ‘pchisq’
  cpp_gped_statCompute_A: no visible global function definition for
    ‘pchisq’
  datamatrix.R.debug: no visible global function definition for
    ‘write.csv’
  fbat.install: no visible global function definition for ‘download.file’
  fbatcStrategyStepLatex: no visible global function definition for ‘str’
  fbatj: no visible global function definition for ‘pchisq’
  fbatme: no visible global function definition for ‘pchisq’
  fbatmeev: no visible global function definition for ‘pchisq’
  ibat.R.debug: no visible global function definition for ‘rnorm’
  mmlroot: no visible global function definition for ‘runif’
  mroot: no visible global function definition for ‘optim’
  mroptim: no visible global function definition for ‘optim’
  mroptim: no visible global function definition for ‘runif’
  mrroot: no visible global function definition for ‘runif’
  mrroot2: no visible global function definition for ‘runif’
  mrroot3: no visible global function definition for ‘rnorm’
  programControl: no visible global function definition for
    ‘getFromNamespace’
  sh.install: no visible global function definition for ‘download.file’
  updateFbatcGUI: no visible global function definition for
    ‘getFromNamespace’
  updateFbatcSSFunc: no visible global function definition for
    ‘getFromNamespace’
  updateFbatgeAllGUI: no visible global function definition for
    ‘getFromNamespace’
  updateFbatgeGUI: no visible global function definition for
    ‘getFromNamespace’
  updateFbatiGUI: no visible global function definition for
    ‘getFromNamespace’
  updateFbatjGUI: no visible global function definition for
    ‘getFromNamespace’
  writeFbatcGUI: no visible global function definition for
    ‘getFromNamespace’
  writeFbatcGUI: no visible global function definition for ‘write.csv’
  writeFbatgeAllGUI: no visible global function definition for
    ‘getFromNamespace’
  writeFbatgeAllGUI: no visible global function definition for
    ‘write.csv’
  writeFbatgeGUI: no visible global function definition for
    ‘getFromNamespace’
  writeFbatgeGUI: no visible global function definition for ‘write.csv’
  writeFbatiGUI: no visible global function definition for
    ‘getFromNamespace’
  writeFbatiGUI: no visible global function definition for ‘write.csv’
  writeFbatjGUI: no visible global function definition for
    ‘getFromNamespace’
  writeFbatjGUI: no visible global function definition for ‘write.csv’
  Undefined global functions or variables:
    download.file getFromNamespace optim pchisq qnorm rnorm runif str
    write.csv
  Consider adding
    importFrom("stats", "optim", "pchisq", "qnorm", "rnorm", "runif")
    importFrom("utils", "download.file", "getFromNamespace", "str",
               "write.csv")
  to your NAMESPACE file.
• checking Rd files ... OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... NOTE
  File ‘fbati/libs/fbati.so’:
    Found no calls to: ‘R_registerRoutines’, ‘R_useDynamicSymbols’
  
  It is good practice to register native routines and to disable symbol
  search.
  
  See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
• checking examples ... [4s/6s] OK
• checking PDF version of manual ... OK
• DONE

Status: 1 WARNING, 2 NOTEs