* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’ * installing *source* package ‘fasano.franceschini.test’ ... ** package ‘fasano.franceschini.test’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpB4FqKU/R.INSTALLddd311bba3683/fasano.franceschini.test/src' g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ProgressBar.cpp -o ProgressBar.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/Rcpp/include' -I'/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include' -I/usr/local/include -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ff_internal_functions.cpp -o ff_internal_functions.o In file included from ff_internal_functions.cpp:10: distance.h: In function ‘long int rangeDistance(const RTree&, const RTree&, std::size_t, std::size_t, const std::vector&)’: distance.h:64:31: warning: comparison of integer expressions of different signedness: ‘std::size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 64 | for (std::size_t i = 0; i < (1 << ndim); ++i) { | ~~^~~~~~~~~~~~~ In file included from ff_internal_functions.cpp:8: RangeTree.h: In instantiation of ‘int RangeTree::RangeTree::countInRange(const std::vector&, const std::vector&, const std::vector&, const std::vector&) const [with T = double; S = int]’: distance.h:82:63: required from here RangeTree.h:1158:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1158 | for (int i = 0; i < lower.size(); i++) { | ~~^~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘std::vector RangeTree::RangeTree::getModifiedLower(const std::vector&, const std::vector&) const [with T = double; S = int]’: RangeTree.h:1164:39: required from ‘int RangeTree::RangeTree::countInRange(const std::vector&, const std::vector&, const std::vector&, const std::vector&) const [with T = double; S = int]’ distance.h:82:63: required from here RangeTree.h:1085:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1085 | for (int i = 0; i < lower.size(); i++) { | ~~^~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘std::vector RangeTree::RangeTree::getModifiedUpper(const std::vector&, const std::vector&) const [with T = double; S = int]’: RangeTree.h:1165:39: required from ‘int RangeTree::RangeTree::countInRange(const std::vector&, const std::vector&, const std::vector&, const std::vector&) const [with T = double; S = int]’ distance.h:82:63: required from here RangeTree.h:1102:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1102 | for (int i = 0; i < upper.size(); i++) { | ~~^~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘int RangeTree::RangeTreeNode::countInRange(const std::vector&, const std::vector&) const [with T = double; S = int]’: RangeTree.h:1164:38: required from ‘int RangeTree::RangeTree::countInRange(const std::vector&, const std::vector&, const std::vector&, const std::vector&) const [with T = double; S = int]’ distance.h:82:63: required from here RangeTree.h:741:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 741 | for (int i = 0; i < nodes.size(); i++) { | ~~^~~~~~~~~~~~~~ RangeTree.h:766:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 766 | for (int i = 0; i < canonicalNodes.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~ RangeTree.h:772:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 772 | } else if (compareInd + 1 == point->dim()) { | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In file included from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/TinyThread.h:7, from /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel.h:6, from ff_internal_functions.cpp:2: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/Common.h: In instantiation of ‘int RcppParallel::resolveValue(const char*, T, U) [with T = long unsigned int; U = int]’: /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel.h:57:28: required from ‘void RcppParallel::parallelReduce(std::size_t, std::size_t, Reducer&, std::size_t, int) [with Reducer = PermutationTest; std::size_t = long unsigned int]’ ff_internal_functions.cpp:366:19: required from here /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/RcppParallel/include/RcppParallel/Common.h:16:23: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 16 | if (requestedValue != defaultValue && requestedValue > 0) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘bool RangeTree::RangeTreeNode::pointInRange(const RangeTree::Point&, const std::vector&, const std::vector&) const [with T = double; S = int]’: RangeTree.h:704:21: required from ‘int RangeTree::RangeTreeNode::countInRange(const std::vector&, const std::vector&) const [with T = double; S = int]’ RangeTree.h:1164:38: required from ‘int RangeTree::RangeTree::countInRange(const std::vector&, const std::vector&, const std::vector&, const std::vector&) const [with T = double; S = int]’ distance.h:82:63: required from here RangeTree.h:683:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 683 | for (int i = 0; i < point.dim(); i++) { | ~~^~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘T RangeTree::Point::operator[](int) const [with T = double; S = int]’: RangeTree.h:712:25: required from ‘int RangeTree::RangeTreeNode::countInRange(const std::vector&, const std::vector&) const [with T = double; S = int]’ RangeTree.h:1164:38: required from ‘int RangeTree::RangeTree::countInRange(const std::vector&, const std::vector&, const std::vector&, const std::vector&) const [with T = double; S = int]’ distance.h:82:63: required from here RangeTree.h:157:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 157 | if(index < 0 || index >= dim()) { | ~~~~~~^~~~~~~~ RangeTree.h: In instantiation of ‘std::vector > > RangeTree::RangeTree::copyPointsToHeap(const std::vector >&) [with T = double; S = int]’: RangeTree.h:1126:72: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:1068:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1068 | for (int i = 0; i < points.size(); i++) { | ~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘std::vector*> RangeTree::RangeTree::getRawPointers(std::vector > >&) [with T = double; S = int]’: RangeTree.h:1127:75: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:1076:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >, std::allocator > > >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 1076 | for (int i = 0; i < points.size(); i++) { | ~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘RangeTree::SortedPointMatrix::SortedPointMatrix(std::vector*>&) [with T = double; S = int]’: RangeTree.h:1128:36: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:344:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 344 | for (int i = 1; i < points.size(); i++) { | ~~^~~~~~~~~~~~~~~ RangeTree.h:345:42: warning: comparison of integer expressions of different signedness: ‘long unsigned int’ and ‘int’ [-Wsign-compare] 345 | if (points[i]->dim() != dim) { | ~~~~~~~~~~~~~~~~~^~~~~~ RangeTree.h:360:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 360 | for (int i = 1; i < points.size(); i++) { | ~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘RangeTree::RangeTreeNode::RangeTreeNode(RangeTree::SortedPointMatrix&, bool, bool) [with T = double; S = int]’: RangeTree.h:1129:57: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:529:41: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 529 | if (spm.getCurrentDim() == point->dim() - 2) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ RangeTree.h:546:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 546 | for (int i = 0; i < allPointsSorted.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~ RangeTree.h:557:84: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 557 | } else if (!onLeftEdge && !onRightEdge && spm.getCurrentDim() + 1 != point->dim()) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘bool RangeTree::PointOrdering::less(const RangeTree::Point&, const RangeTree::Point&) const [with T = double; S = int]’: RangeTree.h:355:56: required from ‘RangeTree::SortedPointMatrix::SortedPointMatrix(std::vector*>&) [with T = double; S = int]’ RangeTree.h:1128:36: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:253:35: warning: comparison of integer expressions of different signedness: ‘const int’ and ‘long unsigned int’ [-Wsign-compare] 253 | if (compareStartIndex >= p1.dim()) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ RangeTree.h:256:47: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 256 | for (int i = compareStartIndex; i < p1.dim(); i++) { | ~~^~~~~~~~~~ RangeTree.h: In instantiation of ‘std::vector RangeTree::SortedPointMatrix::sortOrder(const std::vector*>&, int) [with T = double; S = int]’: RangeTree.h:374:50: required from ‘RangeTree::SortedPointMatrix::SortedPointMatrix(std::vector*>&) [with T = double; S = int]’ RangeTree.h:1128:36: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:305:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 305 | for (int i = 0; i < points.size(); i++) { order[i] = i; } | ~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘void RangeTree::SortedPointMatrix::rearrangeGivenOrder(std::vector*>&, const std::vector&) [with T = double; S = int]’: RangeTree.h:376:25: required from ‘RangeTree::SortedPointMatrix::SortedPointMatrix(std::vector*>&) [with T = double; S = int]’ RangeTree.h:1128:36: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:325:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 325 | for (int i = 0; i < points.size(); i++) { | ~~^~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘void RangeTree::SortedPointMatrix::moveToNextDimension() [with T = double; S = int]’: RangeTree.h:530:44: required from ‘RangeTree::RangeTreeNode::RangeTreeNode(RangeTree::SortedPointMatrix&, bool, bool) [with T = double; S = int]’ RangeTree.h:1129:57: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:389:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector*, std::allocator*> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 389 | for (int i = 0; i < pointsSortedByCurrentDim.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘std::pair, RangeTree::SortedPointMatrix > RangeTree::SortedPointMatrix::splitOnMid() [with T = double; S = int]’: RangeTree.h:533:46: required from ‘RangeTree::RangeTreeNode::RangeTreeNode(RangeTree::SortedPointMatrix&, bool, bool) [with T = double; S = int]’ RangeTree.h:1129:57: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:448:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::deque >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 448 | for (int i = 0; i < redirectionTable.size(); i++) { | ~~^~~~~~~~~~~~~~~~~~~~~~~~~ RangeTree.h: In instantiation of ‘std::vector RangeTree::RangeTreeNode::createGeqPointers(const std::vector&, const std::vector&) [with T = double; S = int]’: RangeTree.h:553:40: required from ‘RangeTree::RangeTreeNode::RangeTreeNode(RangeTree::SortedPointMatrix&, bool, bool) [with T = double; S = int]’ RangeTree.h:1129:57: required from ‘RangeTree::RangeTree::RangeTree(const std::vector >&) [with T = double; S = int]’ distance.h:43:13: required from ‘std::vector > buildRangeTrees(const MatrixT&, std::size_t, std::size_t, const std::vector&) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:89:60: required from ‘long int testStatistic(const MatrixT&, std::size_t, std::size_t, const std::vector&, char) [with MatrixT = RcppParallel::RMatrix; std::size_t = long unsigned int]’ ff_internal_functions.cpp:331:67: required from here RangeTree.h:569:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 569 | for (int i = 0; i < vec.size(); i++) { | ~~^~~~~~~~~~~~ RangeTree.h:570:26: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 570 | while (k < subVec.size() && subVec[k] < vec[i]) { | ~~^~~~~~~~~~~~~~~ g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o fasano.franceschini.test.so ProgressBar.o RcppExports.o ff_internal_functions.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpB4FqKU/R.INSTALLddd311bba3683/fasano.franceschini.test/src' make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpB4FqKU/R.INSTALLddd311bba3683/fasano.franceschini.test/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpB4FqKU/R.INSTALLddd311bba3683/fasano.franceschini.test/src' installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-fasano.franceschini.test/00new/fasano.franceschini.test/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * creating tarball packaged installation of ‘fasano.franceschini.test’ as ‘fasano.franceschini.test_2.2.2_R_x86_64-pc-linux-gnu.tar.gz’ * DONE (fasano.franceschini.test)