• using R Under development (unstable) (2026-08-02 r90338)
• using platform: x86_64-pc-linux-gnu
• R was compiled by     gcc-16 (Debian 16.1.0-3) 16.1.0     GNU Fortran (Debian 16.1.0-3) 16.1.0
• running under: Debian GNU/Linux forky/sid
• using session charset: UTF-8 * current time: 2026-08-03 14:53:14 UTC
• checking for file ‘evolqg/DESCRIPTION’ ... OK
• checking extension type ... Package
• this is package ‘evolqg’ version ‘0.3-6’
• package encoding: UTF-8
• checking CRAN incoming feasibility ... [1s/2s] OK
• checking package namespace information ... OK
• checking package dependencies ... OK
• checking if this is a source package ... OK
• checking if there is a namespace ... OK
• checking for executable files ... OK
• checking for hidden files and directories ... OK
• checking for portable file names ... OK
• checking for sufficient/correct file permissions ... OK
• checking whether package ‘evolqg’ can be installed ... OK See the install log for details.
• used C++ compiler: ‘g++-16 (Debian 16.1.0-3) 16.1.0’
• checking package directory ... OK
• checking for future file timestamps ... OK
• checking DESCRIPTION meta-information ... OK
• checking top-level files ... OK
• checking for left-over files ... OK
• checking index information ... OK
• checking package subdirectories ... OK
• checking code files for non-ASCII characters ... OK
• checking R files for syntax errors ... OK
• checking whether the package can be loaded ... [3s/4s] OK
• checking whether the package can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the package can be unloaded cleanly ... [3s/4s] OK
• checking whether the namespace can be loaded with stated dependencies ... [3s/4s] OK
• checking whether the namespace can be unloaded cleanly ... [3s/4s] OK
• checking loading without being on the library search path ... [3s/3s] OK
• checking use of S3 registration ... OK
• checking dependencies in R code ... OK
• checking S3 generic/method consistency ... OK
• checking replacement functions ... OK
• checking foreign function calls ... OK
• checking R code for possible problems ... [20s/28s] NOTE Found calls to structure() using deprecated special names:   evolqg/tests/testthat/test.TestModularity.r (.Names: 4) '.Names' should be changed to 'names'.
• checking Rd files ... [0s/1s] OK
• checking Rd metadata ... OK
• checking Rd line widths ... OK
• checking Rd cross-references ... OK
• checking for missing documentation entries ... OK
• checking for code/documentation mismatches ... OK
• checking Rd \usage sections ... OK
• checking Rd contents ... OK
• checking for unstated dependencies in examples ... OK
• checking contents of ‘data’ directory ... OK
• checking data for non-ASCII characters ... [0s/0s] OK
• checking data for ASCII and uncompressed saves ... OK
• checking line endings in C/C++/Fortran sources/headers ... OK
• checking line endings in Makefiles ... OK
• checking compilation flags in Makevars ... OK
• checking for GNU extensions in Makefiles ... OK
• checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
• checking use of PKG_*FLAGS in Makefiles ... OK
• checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
• checking pragmas in C/C++ headers and code ... OK
• checking compilation flags used ... OK
• checking compiled code ... OK
• checking examples ... [16s/23s] OK
• checking for unstated dependencies in ‘tests’ ... OK
• checking tests ... [99s/122s] OK   Running ‘testthat.R’ [99s/121s]
• checking PDF version of manual ... [6s/8s] OK
• checking HTML version of manual ... [2s/2s] OK
• checking for non-standard things in the check directory ... OK
• checking for new files in some other directories ... NOTE Found the following files/directories:   ‘~/tmp/scratch/Rtmp0hxxKj’ ‘~/tmp/scratch/Rtmp0wunwj’   ‘~/tmp/scratch/Rtmp1TOa4l’ ‘~/tmp/scratch/Rtmp1Wqkn0’   ‘~/tmp/scratch/Rtmp1q9OsI’ ‘~/tmp/scratch/Rtmp1viQaB’   ‘~/tmp/scratch/Rtmp2JxiSt’ ‘~/tmp/scratch/Rtmp2TEmXs’   ‘~/tmp/scratch/Rtmp2wtF5s’ ‘~/tmp/scratch/Rtmp399xOW’   ‘~/tmp/scratch/Rtmp3VyGMx’ ‘~/tmp/scratch/Rtmp3cpbeD’   ‘~/tmp/scratch/Rtmp4MlCxt’ ‘~/tmp/scratch/Rtmp4ab8RP’   ‘~/tmp/scratch/Rtmp55x0ry’ ‘~/tmp/scratch/Rtmp5CHElk’   ‘~/tmp/scratch/Rtmp6G1NKs’ ‘~/tmp/scratch/Rtmp6G4FCr’   ‘~/tmp/scratch/Rtmp6MEV1E’ ‘~/tmp/scratch/Rtmp6VLrfW’   ‘~/tmp/scratch/Rtmp78mAjC’ ‘~/tmp/scratch/Rtmp7v3rcN’   ‘~/tmp/scratch/Rtmp8RDXBo’ ‘~/tmp/scratch/Rtmp8sE4WX’   ‘~/tmp/scratch/Rtmp93FsfW’ ‘~/tmp/scratch/Rtmp98remp’   ‘~/tmp/scratch/Rtmp9t95h2’ ‘~/tmp/scratch/Rtmp9udiKt’   ‘~/tmp/scratch/RtmpA2Yuoc’ ‘~/tmp/scratch/RtmpA3YvEn’   ‘~/tmp/scratch/RtmpAw38aV’ ‘~/tmp/scratch/RtmpB5xN6x’   ‘~/tmp/scratch/RtmpB8jDBW’ ‘~/tmp/scratch/RtmpBE5NRl’   ‘~/tmp/scratch/RtmpBiOGT6’ ‘~/tmp/scratch/RtmpCJMvA8’   ‘~/tmp/scratch/RtmpCZWC6G’ ‘~/tmp/scratch/RtmpD10E7Z’   ‘~/tmp/scratch/RtmpD97uyI’ ‘~/tmp/scratch/RtmpDXMT2Z’   ‘~/tmp/scratch/RtmpDYrlH7’ ‘~/tmp/scratch/RtmpDp3WwU’   ‘~/tmp/scratch/RtmpEsGOIe’ ‘~/tmp/scratch/RtmpFBEDGZ’   ‘~/tmp/scratch/RtmpFrrz46’ ‘~/tmp/scratch/RtmpFwwvvO’   ‘~/tmp/scratch/RtmpG7rCkp’ ‘~/tmp/scratch/RtmpGCalgr’   ‘~/tmp/scratch/RtmpGQ4YhA’ ‘~/tmp/scratch/RtmpGW4qg8’   ‘~/tmp/scratch/RtmpGpJKJy’ ‘~/tmp/scratch/RtmpGvrLvS’   ‘~/tmp/scratch/RtmpIELFQ1’ ‘~/tmp/scratch/RtmpIZb73Q’   ‘~/tmp/scratch/RtmpIis526’ ‘~/tmp/scratch/RtmpIng1Si’   ‘~/tmp/scratch/RtmpIsoloW’ ‘~/tmp/scratch/RtmpJ1yUIE’   ‘~/tmp/scratch/RtmpJOSop1’ ‘~/tmp/scratch/RtmpJiAGjP’   ‘~/tmp/scratch/RtmpJiClLz’ ‘~/tmp/scratch/RtmpKEsVxp’   ‘~/tmp/scratch/RtmpKVT1vc’ ‘~/tmp/scratch/RtmpLJepKh’   ‘~/tmp/scratch/RtmpMyUTnu’ ‘~/tmp/scratch/RtmpObrW4D’   ‘~/tmp/scratch/RtmpPRMmSf’ ‘~/tmp/scratch/RtmpPpBEGT’   ‘~/tmp/scratch/RtmpQAEqjn’ ‘~/tmp/scratch/RtmpQKE8AA’   ‘~/tmp/scratch/RtmpQbAIcB’ ‘~/tmp/scratch/RtmpQdII3c’   ‘~/tmp/scratch/RtmpR4Ak9P’ ‘~/tmp/scratch/RtmpRA9fbg’   ‘~/tmp/scratch/RtmpRKhMKs’ ‘~/tmp/scratch/RtmpRd3Kmz’   ‘~/tmp/scratch/RtmpSIKsuV’ ‘~/tmp/scratch/RtmpSmThtF’   ‘~/tmp/scratch/RtmpSt2g71’ ‘~/tmp/scratch/RtmpTAtmpl’   ‘~/tmp/scratch/RtmpTKdk0D’ ‘~/tmp/scratch/RtmpTh85Kp’   ‘~/tmp/scratch/RtmpUX8lCD’ ‘~/tmp/scratch/RtmpVQhngJ’   ‘~/tmp/scratch/RtmpVgEXDU’ ‘~/tmp/scratch/RtmpW5241G’   ‘~/tmp/scratch/RtmpWFMc3f’ ‘~/tmp/scratch/RtmpWbeODs’   ‘~/tmp/scratch/RtmpWxQGUK’ ‘~/tmp/scratch/RtmpX2I6Vh’   ‘~/tmp/scratch/RtmpXPHm4U’ ‘~/tmp/scratch/RtmpXbC7zx’   ‘~/tmp/scratch/RtmpXeDYWS’ ‘~/tmp/scratch/RtmpXq9vBr’   ‘~/tmp/scratch/RtmpYAGY9W’ ‘~/tmp/scratch/RtmpYFc02U’   ‘~/tmp/scratch/RtmpYszU96’ ‘~/tmp/scratch/RtmpZ8DCYU’   ‘~/tmp/scratch/RtmpZgQGcE’ ‘~/tmp/scratch/RtmpaEsYfJ’   ‘~/tmp/scratch/RtmpboYo7L’ ‘~/tmp/scratch/RtmpbpLEJ7’   ‘~/tmp/scratch/Rtmpc1ZtEQ’ ‘~/tmp/scratch/RtmpcAAFux’   ‘~/tmp/scratch/RtmpccZ0p9’ ‘~/tmp/scratch/RtmpdipyU8’   ‘~/tmp/scratch/Rtmpdnh0gV’ ‘~/tmp/scratch/Rtmpe3z0KE’   ‘~/tmp/scratch/RtmpfNCN1h’ ‘~/tmp/scratch/Rtmpg2D9LG’   ‘~/tmp/scratch/RtmpgK7Rd7’ ‘~/tmp/scratch/RtmpgYwBQI’   ‘~/tmp/scratch/RtmpgeqqZS’ ‘~/tmp/scratch/RtmpggytWW’   ‘~/tmp/scratch/Rtmpgkzufx’ ‘~/tmp/scratch/RtmpgmP7wz’   ‘~/tmp/scratch/RtmpgofjRh’ ‘~/tmp/scratch/RtmphCg448’   ‘~/tmp/scratch/Rtmphi5iKk’ ‘~/tmp/scratch/RtmphxagIQ’   ‘~/tmp/scratch/RtmpiQv4fD’ ‘~/tmp/scratch/Rtmpifasgf’   ‘~/tmp/scratch/RtmpimZVGv’ ‘~/tmp/scratch/RtmpiouTWv’   ‘~/tmp/scratch/RtmpjKA51I’ ‘~/tmp/scratch/RtmpjMXLqH’   ‘~/tmp/scratch/RtmpjjQUqG’ ‘~/tmp/scratch/RtmpjjyQHW’   ‘~/tmp/scratch/RtmpjqfnIE’ ‘~/tmp/scratch/RtmpkLKXyk’   ‘~/tmp/scratch/Rtmpl3A3bb’ ‘~/tmp/scratch/Rtmpl5Hwcp’   ‘~/tmp/scratch/RtmplMDr8J’ ‘~/tmp/scratch/RtmplTY4w3’   ‘~/tmp/scratch/Rtmplxsqs6’ ‘~/tmp/scratch/RtmpnO3SVa’   ‘~/tmp/scratch/RtmpnaSUp0’ ‘~/tmp/scratch/RtmpnjItlm’   ‘~/tmp/scratch/RtmpnpY3OZ’ ‘~/tmp/scratch/RtmpoXKIOm’   ‘~/tmp/scratch/Rtmpoc3E6A’ ‘~/tmp/scratch/Rtmpp4vMnN’   ‘~/tmp/scratch/RtmppJJXr3’ ‘~/tmp/scratch/RtmpqE2Upz’   ‘~/tmp/scratch/RtmpqGCT6A’ ‘~/tmp/scratch/RtmpqTyV1V’   ‘~/tmp/scratch/RtmprWWIgy’ ‘~/tmp/scratch/RtmprifaDG’   ‘~/tmp/scratch/RtmpsByndI’ ‘~/tmp/scratch/RtmpsTz4sW’   ‘~/tmp/scratch/RtmptChsfq’ ‘~/tmp/scratch/RtmpudJhrK’   ‘~/tmp/scratch/RtmpuxlkXA’ ‘~/tmp/scratch/Rtmpv0i7nx’   ‘~/tmp/scratch/Rtmpv5DY9v’ ‘~/tmp/scratch/RtmpvIfwSp’   ‘~/tmp/scratch/RtmpwyXZgd’ ‘~/tmp/scratch/RtmpxK6pMZ’   ‘~/tmp/scratch/RtmpxSYjX7’ ‘~/tmp/scratch/RtmpxzVtIJ’   ‘~/tmp/scratch/RtmpzFE6DH’ ‘~/tmp/scratch/RtmpzIyVIm’   ‘~/tmp/scratch/RtmpzZzyu2’ ‘~/tmp/scratch/RtmpzqcNJx’   ‘~/tmp/scratch/RtmpzsKCJn’ ‘~/tmp/scratch/xvfb-run.0jo2fS’   ‘~/tmp/scratch/xvfb-run.12CYND’ ‘~/tmp/scratch/xvfb-run.4jgbbv’   ‘~/tmp/scratch/xvfb-run.5ByUhB’ ‘~/tmp/scratch/xvfb-run.5pOaxB’   ‘~/tmp/scratch/xvfb-run.6ZT39K’ ‘~/tmp/scratch/xvfb-run.6i6VDB’   ‘~/tmp/scratch/xvfb-run.AMnJw5’ ‘~/tmp/scratch/xvfb-run.B8oyZG’   ‘~/tmp/scratch/xvfb-run.BL2HZa’ ‘~/tmp/scratch/xvfb-run.BTYEXu’   ‘~/tmp/scratch/xvfb-run.BiaIXc’ ‘~/tmp/scratch/xvfb-run.CiKhPA’   ‘~/tmp/scratch/xvfb-run.DZJBGb’ ‘~/tmp/scratch/xvfb-run.EXwlWB’   ‘~/tmp/scratch/xvfb-run.Ep74WJ’ ‘~/tmp/scratch/xvfb-run.G8lCal’   ‘~/tmp/scratch/xvfb-run.GkKXVs’ ‘~/tmp/scratch/xvfb-run.HKLlMr’   ‘~/tmp/scratch/xvfb-run.HnaYSl’ ‘~/tmp/scratch/xvfb-run.IzqRf5’   ‘~/tmp/scratch/xvfb-run.J5a0wX’ ‘~/tmp/scratch/xvfb-run.Jb008m’   ‘~/tmp/scratch/xvfb-run.Jh3DCE’ ‘~/tmp/scratch/xvfb-run.KLdTKn’   ‘~/tmp/scratch/xvfb-run.KhOqhn’ ‘~/tmp/scratch/xvfb-run.KwnUlC’   ‘~/tmp/scratch/xvfb-run.MDdSvw’ ‘~/tmp/scratch/xvfb-run.MGvjZg’   ‘~/tmp/scratch/xvfb-run.NBNZa3’ ‘~/tmp/scratch/xvfb-run.Nv877A’   ‘~/tmp/scratch/xvfb-run.NyuN30’ ‘~/tmp/scratch/xvfb-run.Oll232’   ‘~/tmp/scratch/xvfb-run.OqEJEV’ ‘~/tmp/scratch/xvfb-run.OyVNT2’   ‘~/tmp/scratch/xvfb-run.Sh22VZ’ ‘~/tmp/scratch/xvfb-run.SzGcFz’   ‘~/tmp/scratch/xvfb-run.TFO2Xg’ ‘~/tmp/scratch/xvfb-run.THymln’   ‘~/tmp/scratch/xvfb-run.UFsYws’ ‘~/tmp/scratch/xvfb-run.UouvSR’   ‘~/tmp/scratch/xvfb-run.UtSGNm’ ‘~/tmp/scratch/xvfb-run.V4anGK’   ‘~/tmp/scratch/xvfb-run.XOAxcC’ ‘~/tmp/scratch/xvfb-run.XuEAa8’   ‘~/tmp/scratch/xvfb-run.YP0D4d’ ‘~/tmp/scratch/xvfb-run.YhdQoF’   ‘~/tmp/scratch/xvfb-run.YiPDGX’ ‘~/tmp/scratch/xvfb-run.ZAZfPd’   ‘~/tmp/scratch/xvfb-run.ZPkn5I’ ‘~/tmp/scratch/xvfb-run.ZcioXM’   ‘~/tmp/scratch/xvfb-run.ZjGNUK’ ‘~/tmp/scratch/xvfb-run.aAeeGp’   ‘~/tmp/scratch/xvfb-run.awWJTn’ ‘~/tmp/scratch/xvfb-run.bM6vwo’   ‘~/tmp/scratch/xvfb-run.bXpOea’ ‘~/tmp/scratch/xvfb-run.bbvRJU’   ‘~/tmp/scratch/xvfb-run.cvI43G’ ‘~/tmp/scratch/xvfb-run.ecX77I’   ‘~/tmp/scratch/xvfb-run.f5Tk5v’ ‘~/tmp/scratch/xvfb-run.fdLi5f’   ‘~/tmp/scratch/xvfb-run.gIQSMN’ ‘~/tmp/scratch/xvfb-run.h7kuye’   ‘~/tmp/scratch/xvfb-run.llHtOK’ ‘~/tmp/scratch/xvfb-run.lzfre2’   ‘~/tmp/scratch/xvfb-run.mO1Bu8’ ‘~/tmp/scratch/xvfb-run.n3Zqgu’   ‘~/tmp/scratch/xvfb-run.nSgWIU’ ‘~/tmp/scratch/xvfb-run.oyGfNz’   ‘~/tmp/scratch/xvfb-run.qcP5wr’ ‘~/tmp/scratch/xvfb-run.rR2atu’   ‘~/tmp/scratch/xvfb-run.sSZaZS’ ‘~/tmp/scratch/xvfb-run.sVYgbB’   ‘~/tmp/scratch/xvfb-run.tF2e2s’ ‘~/tmp/scratch/xvfb-run.tQVM3N’   ‘~/tmp/scratch/xvfb-run.tnAhrT’ ‘~/tmp/scratch/xvfb-run.vJG0Uo’   ‘~/tmp/scratch/xvfb-run.w2WSgX’ ‘~/tmp/scratch/xvfb-run.wj4GHF’   ‘~/tmp/scratch/xvfb-run.zMcELv’ ‘~/tmp/scratch/xvfb-run.zVdwfr’
• DONE

Status: 2 NOTEs