* installing to library ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages’
* installing *source* package ‘depmix’ ...
** package ‘depmix’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc-13 (Debian 13.2.0-23) 13.2.0’
using C++ compiler: ‘g++-13 (Debian 13.2.0-23) 13.2.0’
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp99X4Bz/R.INSTALLd0ab2103b626b/depmix/src'
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c depmix_init.c -o depmix_init.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c derdist.c -o derdist.o
gcc-13 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native  -c hessdist.c -o hessdist.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c logl.cc -o logl.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c matrix.cc -o matrix.o
matrix.cc: In member function ‘matrix matrix::operator*(const matrix&)’:
matrix.cc:251:33: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation]
  251 |                                 for (int i=0;i<row;i++)
      |                                 ^~~
matrix.cc:255:41: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’
  255 |                                         return(target);
      |                                         ^~~~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mdmm.cc -o mdmm.o
mdmm.cc: In member function ‘int mdmm::itemnr(int)’:
mdmm.cc:362:13: warning: variable ‘prev’ set but not used [-Wunused-but-set-variable]
  362 |         int prev=colnr;
      |             ^~~~
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mgdmm.cc -o mgdmm.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mmts.cc -o mmts.o
g++-13 -std=gnu++17 -I"/home/hornik/tmp/R.check/r-devel-gcc/Work/build/include" -DNDEBUG   -I/usr/local/include -D_FORTIFY_SOURCE=3   -fpic  -g -O2 -Wall -pedantic -mtune=native   -c mts.cc -o mts.o
g++-13 -std=gnu++17 -shared -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -Wl,-O1 -o depmix.so depmix_init.o derdist.o hessdist.o logl.o matrix.o mdmm.o mgdmm.o mmts.o mts.o -L/home/hornik/tmp/R.check/r-devel-gcc/Work/build/lib -lR
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp99X4Bz/R.INSTALLd0ab2103b626b/depmix/src'
make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp99X4Bz/R.INSTALLd0ab2103b626b/depmix/src'
make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp99X4Bz/R.INSTALLd0ab2103b626b/depmix/src'
installing to /home/hornik/tmp/R.check/r-devel-gcc/Work/build/Packages/00LOCK-depmix/00new/depmix/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* creating tarball
packaged installation of ‘depmix’ as ‘depmix_0.9.16_R_x86_64-pc-linux-gnu.tar.gz’
* DONE (depmix)